Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13141 and 13142 are separated by 704 nucleotides13142 and 13143 are separated by 629 nucleotides13143 and 13144 are separated by 903 nucleotides13144 and 13145 are separated by 644 nucleotides mRNA_4773: 13141 - KOG0254 Predicted transporter (major facilitator superfamily), at 984,416 to 986,874 13141 mRNA_4774: 13142 - K02998 RP-SAe, RPSA small subunit ribosomal protein SAe, at 987,579 to 988,756 13142 mRNA_4775: 13143 - K01724 PCBD, phhB 4a-hydroxytetrahydrobiopterin dehydratase, at 989,386 to 989,809 13143 mRNA_4776: 13144 - Hypothetical Protein, at 990,713 to 991,663 13144 mRNA_4777: 13145 - Hypothetical Protein, at 992,308 to 993,106 13145
Group Condition mRNA_4773 mRNA_4774 mRNA_4775 mRNA_4776 mRNA_4777
13141 13142 13143 13144 13145
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 N.D. -0.3 +0.6 -0.9
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 N.D. +0.5 -0.4 -0.3
growth on ypd YPD -0.0 N.D. -0.5 +0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. -0.1 +0.3 -0.8
ypd buoyancy 40 hrs High Buoyancy -0.8 N.D. +0.5 +0.2 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 N.D. +0.1 +0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.8 N.D. +0.0 +0.0 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 N.D. -0.2 +0.2 +0.3
growth on ricinoleic acid YNB Glucose -0.2 N.D. +0.2 -0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. +0.2 +0.4 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.4 N.D. +0.1 -0.1 +0.4
growth on oleic acid YNB Glucose +0.4 N.D. +0.2 +0.4 -1.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. -0.6 -0.3 +1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 N.D. +0.1 +0.3 +0.8
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. -0.3 +0.2 +0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. -0.2 +0.0 +1.2
auxotrophy Dropout Complete +0.3 N.D. -0.0 +0.4 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. -0.3 +0.0 +1.1
growth on oleic acid YNB Oleic Acid +0.8 N.D. -0.1 +0.5 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.0 +0.4 +1.5
auxotrophy YNB Glucose +0.4 N.D. +0.1 +0.4 +1.7
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