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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13142 and 13143 are separated by 629 nucleotides
13143 and 13144 are separated by 903 nucleotides
13144 and 13145 are separated by 644 nucleotides
13145 and 13146 are separated by 872 nucleotides
mRNA_4774: 13142 - K02998 RP-SAe, RPSA small subunit ribosomal protein SAe, at 987,579 to 988,756
13142
mRNA_4775: 13143 - K01724 PCBD, phhB 4a-hydroxytetrahydrobiopterin dehydratase, at 989,386 to 989,809
13143
mRNA_4776: 13144 - Hypothetical Protein, at 990,713 to 991,663
13144
mRNA_4777: 13145 - Hypothetical Protein, at 992,308 to 993,106
13145
mRNA_4778: 13146 - Hypothetical Protein, at 993,979 to 994,945
13146
Group
Condition
mRNA
_4774
mRNA
_4775
mRNA
_4776
mRNA
_4777
mRNA
_4778
13142
13143
13144
13145
13146
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
+0.6
-0.9
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
+0.3
-0.8
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
+0.0
-0.2
-0.6
growth on oleic acid
YNB Glucose
N.D.
+0.2
+0.4
-1.0
-0.2
growth on ricinoleic acid
YNB Glucose
N.D.
+0.2
-0.1
+0.0
-0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.5
+0.2
-0.5
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.2
+0.4
-0.6
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.2
+0.2
+0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.5
-0.4
-0.3
+0.3
growth on ypd
YPD
N.D.
-0.5
+0.2
-0.3
+0.8
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
-0.1
+0.4
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.0
+0.0
+0.4
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.1
+0.3
+0.8
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.6
-0.3
+1.0
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.2
+0.0
+1.2
-0.2
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
+0.5
+0.2
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.3
+0.0
+1.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.3
+0.2
+0.8
+0.5
auxotrophy
Dropout Complete
N.D.
-0.0
+0.4
+0.2
+0.7
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.0
+0.4
+1.5
+0.5
auxotrophy
YNB Glucose
N.D.
+0.1
+0.4
+1.7
+0.4
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