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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13148 and 13149 are separated by 384 nucleotides
13149 and 13150 are separated by 20 nucleotides
13150 and 13151 are separated by 297 nucleotides
13151 and 13152 are separated by 915 nucleotides
mRNA_4780: 13148 - SUPERFAMILY--SSF52047, at 997,271 to 1,001,046
13148
mRNA_4781: 13149 - Hypothetical Protein, at 1,001,431 to 1,001,991
13149
mRNA_4782: 13150 - Hypothetical Protein, at 1,002,012 to 1,003,066
13150
mRNA_4783: 13151 - Hypothetical Protein, at 1,003,364 to 1,007,134
13151
mRNA_4784: 13152 - BLAST calmodulin-like protein [Mycena chlorophos], at 1,008,050 to 1,008,769
13152
Group
Condition
mRNA
_4780
mRNA
_4781
mRNA
_4782
mRNA
_4783
mRNA
_4784
13148
13149
13150
13151
13152
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
N.D.
N.D.
-0.1
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
N.D.
N.D.
+0.0
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
N.D.
N.D.
+0.0
-0.7
auxotrophy
YNB Glucose 75mM Arginine
+0.0
N.D.
N.D.
-0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
N.D.
N.D.
-0.1
-0.3
auxotrophy
YNB Glucose
+0.1
N.D.
N.D.
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
N.D.
N.D.
+0.1
-0.3
growth on oleic acid
YNB Oleic Acid
+0.1
N.D.
N.D.
+0.0
-0.3
auxotrophy
Dropout Complete
+0.1
N.D.
N.D.
-0.2
+0.1
growth on oleic acid
YNB Glucose
+0.0
N.D.
N.D.
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
N.D.
N.D.
+0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
N.D.
N.D.
-0.1
+0.0
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
N.D.
-0.2
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.1
N.D.
N.D.
-0.2
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
N.D.
N.D.
+0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
N.D.
N.D.
-0.0
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.0
N.D.
N.D.
+0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
N.D.
+0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
N.D.
N.D.
-0.0
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
N.D.
N.D.
-0.0
+0.4
growth on ypd
YPD
-0.1
N.D.
N.D.
+0.1
+0.6
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