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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13151 and 13152 are separated by 915 nucleotides
13152 and 13153 are separated by 309 nucleotides
13153 and 13154 are separated by 614 nucleotides
13154 and 13155 are separated by 142 nucleotides
mRNA_4783: 13151 - Hypothetical Protein, at 1,003,364 to 1,007,134
13151
mRNA_4784: 13152 - BLAST calmodulin-like protein [Mycena chlorophos], at 1,008,050 to 1,008,769
13152
mRNA_4785: 13153 - KOG1577 Aldo/keto reductase family proteins, at 1,009,079 to 1,010,386
13153
mRNA_4786: 13154 - Hypothetical Protein, at 1,011,001 to 1,011,498
13154
mRNA_4787: 13155 - SUPERFAMILY--SSF49785, at 1,011,641 to 1,014,528
13155
Group
Condition
mRNA
_4783
mRNA
_4784
mRNA
_4785
mRNA
_4786
mRNA
_4787
13151
13152
13153
13154
13155
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.7
-0.8
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.6
-0.2
+0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
-0.7
-0.2
-0.2
+0.2
growth on oleic acid
YNB Oleic Acid
+0.0
-0.3
-0.2
-0.0
-0.3
growth on ricinoleic acid
YNB Glucose
-0.2
+0.2
-0.0
-0.1
-0.6
growth on oleic acid
YNB Glucose
+0.0
-0.1
-0.3
+0.0
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.3
-0.3
-0.2
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
+0.4
-0.2
-0.0
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.2
+0.4
-0.0
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
-0.0
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.2
-0.3
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.3
-0.2
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.1
-0.0
+0.1
-0.2
auxotrophy
YNB Glucose
-0.2
-0.2
+0.3
+0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.3
-0.1
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.1
-0.1
-0.0
+0.0
auxotrophy
Dropout Complete
-0.2
+0.1
+0.3
-0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.1
-0.0
-0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.1
+0.0
-0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.0
+0.1
-0.2
+0.5
growth on ypd
YPD
+0.1
+0.6
-0.3
-0.1
+0.6
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