Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13155 and 13156 are separated by 212 nucleotides13156 and 13157 are separated by 358 nucleotides13157 and 13158 are separated by 737 nucleotides13158 and 13159 are separated by 1350 nucleotides mRNA_4787: 13155 - SUPERFAMILY--SSF49785, at 1,011,641 to 1,014,528 13155 mRNA_4788: 13156 - KOG0143 Iron/ascorbate family oxidoreductases, at 1,014,741 to 1,016,024 13156 mRNA_4789: 13157 - K18402 PHF20 PHD finger protein 20, at 1,016,383 to 1,018,943 13157 mRNA_4790: 13158 - Hypothetical Protein, at 1,019,681 to 1,020,226 13158 mRNA_4791: 13159 - ProSiteProfiles-BTB domain profile.-PS50097, at 1,021,577 to 1,022,865 13159
Group Condition mRNA_4787 mRNA_4788 mRNA_4789 mRNA_4790 mRNA_4791
13155 13156 13157 13158 13159
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.3 N.D. -0.8 -0.3
growth on oleic acid YNB Glucose -0.3 -0.5 N.D. +0.0 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.1 N.D. -0.5 -0.0
growth on ricinoleic acid YNB Glucose -0.6 +0.2 N.D. +0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.3 N.D. -0.1 -0.0
auxotrophy YNB Glucose -0.2 -0.3 N.D. +0.3 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.1 N.D. +0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 N.D. -0.4 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.3 N.D. -0.4 -0.2
growth on oleic acid YNB Oleic Acid -0.3 +0.0 N.D. +0.3 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.1 N.D. -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.0 N.D. +0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 N.D. +0.6 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.2 N.D. +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.0 N.D. +0.2 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.3 N.D. +0.4 -0.1
auxotrophy Dropout Complete -0.0 +0.0 N.D. +0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 +0.1 N.D. -0.3 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.3 N.D. -0.6 +0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.0 N.D. +0.2 +0.3
growth on ypd YPD +0.6 +0.0 N.D. +0.6 +0.3
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