Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13156 and 13157 are separated by 358 nucleotides13157 and 13158 are separated by 737 nucleotides13158 and 13159 are separated by 1350 nucleotides13159 and 13160 are separated by 940 nucleotides mRNA_4788: 13156 - KOG0143 Iron/ascorbate family oxidoreductases, at 1,014,741 to 1,016,024 13156 mRNA_4789: 13157 - K18402 PHF20 PHD finger protein 20, at 1,016,383 to 1,018,943 13157 mRNA_4790: 13158 - Hypothetical Protein, at 1,019,681 to 1,020,226 13158 mRNA_4791: 13159 - ProSiteProfiles-BTB domain profile.-PS50097, at 1,021,577 to 1,022,865 13159 mRNA_4792: 13160 - Hypothetical Protein, at 1,023,806 to 1,024,351 13160
Group Condition mRNA_4788 mRNA_4789 mRNA_4790 mRNA_4791 mRNA_4792
13156 13157 13158 13159 13160
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. +0.4 -0.1 -1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. +0.2 -0.4 -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. +0.1 -0.0 -0.9
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. -0.8 -0.3 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. -0.1 -0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. -0.3 -0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. -0.5 -0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. -0.4 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.4 +0.2 +0.1
growth on oleic acid YNB Glucose -0.5 N.D. +0.0 -0.2 +0.5
auxotrophy YNB Glucose -0.3 N.D. +0.3 -0.5 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. +0.2 -0.2 -0.1
growth on ricinoleic acid YNB Glucose +0.2 N.D. +0.0 -0.3 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. +0.6 -0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. -0.3 +0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. +0.0 -0.1 +0.2
auxotrophy Dropout Complete +0.0 N.D. +0.4 -0.2 +0.2
growth on oleic acid YNB Oleic Acid +0.0 N.D. +0.3 -0.3 +0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. +0.2 +0.3 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. -0.6 +0.6 +0.5
growth on ypd YPD +0.0 N.D. +0.6 +0.3 +0.2
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