Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13157 and 13158 are separated by 737 nucleotides13158 and 13159 are separated by 1350 nucleotides13159 and 13160 are separated by 940 nucleotides13160 and 13161 are separated by 1516 nucleotides mRNA_4789: 13157 - K18402 PHF20 PHD finger protein 20, at 1,016,383 to 1,018,943 13157 mRNA_4790: 13158 - Hypothetical Protein, at 1,019,681 to 1,020,226 13158 mRNA_4791: 13159 - ProSiteProfiles-BTB domain profile.-PS50097, at 1,021,577 to 1,022,865 13159 mRNA_4792: 13160 - Hypothetical Protein, at 1,023,806 to 1,024,351 13160 mRNA_4793: 13161 - HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113, at 1,025,868 to 1,027,318 13161
Group Condition mRNA_4789 mRNA_4790 mRNA_4791 mRNA_4792 mRNA_4793
13157 13158 13159 13160 13161
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 -0.2 -0.1 -4.6
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.4 -0.1 -1.0 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 -0.4 -0.8 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 -0.0 -0.9 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 -0.1 -0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.5 -0.0 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.8 -0.3 +0.7 -0.0
growth on ricinoleic acid YNB Glucose N.D. +0.0 -0.3 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 -0.0 -0.3 +0.0
auxotrophy YNB Glucose N.D. +0.3 -0.5 +0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 -0.2 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.4 +0.2 +0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 +0.1 +0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 -0.1 +0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.6 +0.6 +0.5 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.6 -0.4 -0.1 +0.2
growth on oleic acid YNB Glucose N.D. +0.0 -0.2 +0.5 +0.1
auxotrophy Dropout Complete N.D. +0.4 -0.2 +0.2 +0.0
growth on oleic acid YNB Oleic Acid N.D. +0.3 -0.3 +0.6 +0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.3 +0.2 +0.3
growth on ypd YPD N.D. +0.6 +0.3 +0.2 +0.1
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