Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13157 and 13158 are separated by 737 nucleotides
13158 and 13159 are separated by 1350 nucleotides
13159 and 13160 are separated by 940 nucleotides
13160 and 13161 are separated by 1516 nucleotides
mRNA_4789: 13157 - K18402 PHF20 PHD finger protein 20, at 1,016,383 to 1,018,943
13157
mRNA_4790: 13158 - Hypothetical Protein, at 1,019,681 to 1,020,226
13158
mRNA_4791: 13159 - ProSiteProfiles-BTB domain profile.-PS50097, at 1,021,577 to 1,022,865
13159
mRNA_4792: 13160 - Hypothetical Protein, at 1,023,806 to 1,024,351
13160
mRNA_4793: 13161 - HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113, at 1,025,868 to 1,027,318
13161
Group
Condition
mRNA
_4789
mRNA
_4790
mRNA
_4791
mRNA
_4792
mRNA
_4793
13157
13158
13159
13160
13161
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.4
-0.2
-0.1
-4.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.4
-0.1
-1.0
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
-0.4
-0.8
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
-0.0
-0.9
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
-0.1
-0.3
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.5
-0.0
-0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.8
-0.3
+0.7
-0.0
growth on ricinoleic acid
YNB Glucose
N.D.
+0.0
-0.3
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.0
-0.3
+0.0
auxotrophy
YNB Glucose
N.D.
+0.3
-0.5
+0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
-0.2
-0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.4
+0.2
+0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.3
+0.1
+0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
-0.1
+0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.6
+0.6
+0.5
-0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.6
-0.4
-0.1
+0.2
growth on oleic acid
YNB Glucose
N.D.
+0.0
-0.2
+0.5
+0.1
auxotrophy
Dropout Complete
N.D.
+0.4
-0.2
+0.2
+0.0
growth on oleic acid
YNB Oleic Acid
N.D.
+0.3
-0.3
+0.6
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
+0.3
+0.2
+0.3
growth on ypd
YPD
N.D.
+0.6
+0.3
+0.2
+0.1
remove
mRNA_4789
plot
remove
mRNA_4790
plot
remove
mRNA_4791
remove
mRNA_4792
plot
remove
mRNA_4793
plot