Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13159 and 13160 are separated by 940 nucleotides13160 and 13161 are separated by 1516 nucleotides13161 and 13162 are separated by 352 nucleotides13162 and 13163 are separated by 353 nucleotides mRNA_4791: 13159 - ProSiteProfiles-BTB domain profile.-PS50097, at 1,021,577 to 1,022,865 13159 mRNA_4792: 13160 - Hypothetical Protein, at 1,023,806 to 1,024,351 13160 mRNA_4793: 13161 - HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113, at 1,025,868 to 1,027,318 13161 mRNA_4794: 13162 - Hypothetical Protein, at 1,027,671 to 1,028,225 13162 mRNA_4795: 13163 - Hypothetical Protein, at 1,028,579 to 1,029,667 13163
Group Condition mRNA_4791 mRNA_4792 mRNA_4793 mRNA_4794 mRNA_4795
13159 13160 13161 13162 13163
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1 -4.6 -0.5 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.3 -0.1 -1.2 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -1.0 -0.5 +0.6 +0.4
growth on ricinoleic acid YNB Glucose -0.3 -0.0 -0.1 -0.3 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.1 +0.1 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.1 +0.2 -0.6 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.9 -0.1 +0.7 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 +0.1 +0.1 +0.1
auxotrophy YNB Glucose -0.5 +0.2 -0.2 +0.1 +0.4
auxotrophy Dropout Complete -0.2 +0.2 +0.0 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.8 -0.0 +0.7 +0.7
growth on oleic acid YNB Oleic Acid -0.3 +0.6 +0.0 -0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.1 +0.2 +0.1 +0.3
growth on oleic acid YNB Glucose -0.2 +0.5 +0.1 +0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 +0.2 -0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.7 -0.0 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.3 +0.0 +1.0 -0.1
growth on ypd YPD +0.3 +0.2 +0.1 -0.4 +0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.2 -0.0 +0.2 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.6 +0.5 -0.2 -0.5 +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.2 +0.3 +0.0 +0.2
remove
mRNA_4791
plot
remove
mRNA_4792
plot
remove
mRNA_4793
remove
mRNA_4794
plot
remove
mRNA_4795
plot