Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13160 and 13161 are separated by 1516 nucleotides13161 and 13162 are separated by 352 nucleotides13162 and 13163 are separated by 353 nucleotides13163 and 13164 are separated by 1468 nucleotides mRNA_4792: 13160 - Hypothetical Protein, at 1,023,806 to 1,024,351 13160 mRNA_4793: 13161 - HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113, at 1,025,868 to 1,027,318 13161 mRNA_4794: 13162 - Hypothetical Protein, at 1,027,671 to 1,028,225 13162 mRNA_4795: 13163 - Hypothetical Protein, at 1,028,579 to 1,029,667 13163 mRNA_4796: 13164 - Hypothetical Protein, at 1,031,136 to 1,031,744 13164
Group Condition mRNA_4792 mRNA_4793 mRNA_4794 mRNA_4795 mRNA_4796
13160 13161 13162 13163 13164
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -4.6 -0.5 -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.1 -1.2 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.0 -0.5 +0.6 +0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.2 -0.6 -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 -0.1 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.0 -0.1 -0.3 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.9 -0.1 +0.7 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.2 -0.5 +0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 +0.1 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 -0.2 +0.2 N.D.
auxotrophy Dropout Complete +0.2 +0.0 +0.3 -0.2 N.D.
growth on ypd YPD +0.2 +0.1 -0.4 +0.5 N.D.
growth on oleic acid YNB Oleic Acid +0.6 +0.0 -0.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 -0.0 +0.7 +0.7 N.D.
growth on oleic acid YNB Glucose +0.5 +0.1 +0.0 -0.0 N.D.
auxotrophy YNB Glucose +0.2 -0.2 +0.1 +0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.2 +0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.0 +1.0 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.0 +0.2 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.7 -0.0 +0.2 -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.3 +0.0 +0.2 N.D.
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