Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13161 and 13162 are separated by 352 nucleotides13162 and 13163 are separated by 353 nucleotides13163 and 13164 are separated by 1468 nucleotides13164 and 13165 are separated by 748 nucleotides mRNA_4793: 13161 - HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113, at 1,025,868 to 1,027,318 13161 mRNA_4794: 13162 - Hypothetical Protein, at 1,027,671 to 1,028,225 13162 mRNA_4795: 13163 - Hypothetical Protein, at 1,028,579 to 1,029,667 13163 mRNA_4796: 13164 - Hypothetical Protein, at 1,031,136 to 1,031,744 13164 mRNA_4797: 13165 - K02901 RP-L27e, RPL27 large subunit ribosomal protein L27e, at 1,032,493 to 1,033,632 13165
Group Condition mRNA_4793 mRNA_4794 mRNA_4795 mRNA_4796 mRNA_4797
13161 13162 13163 13164 13165
growth on ricinoleic acid YNB Methylricinoleic Acid -4.6 -0.5 -0.2 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -1.2 -0.4 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.6 -0.0 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.5 +0.4 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.1 -0.3 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.1 -0.1 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.0 -0.0 -0.2 N.D. N.D.
growth on oleic acid YNB Glucose +0.1 +0.0 -0.0 N.D. N.D.
auxotrophy Dropout Complete +0.0 +0.3 -0.2 N.D. N.D.
growth on ypd YPD +0.1 -0.4 +0.5 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.2 -0.0 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.2 +0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 +0.1 N.D. N.D.
auxotrophy YNB Glucose -0.2 +0.1 +0.4 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.2 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.6 +0.4 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.0 +0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.7 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +1.0 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.7 +0.7 N.D. N.D.
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