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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13162 and 13163 are separated by 353 nucleotides
13163 and 13164 are separated by 1468 nucleotides
13164 and 13165 are separated by 748 nucleotides
13165 and 13166 are separated by 622 nucleotides
mRNA_4794: 13162 - Hypothetical Protein, at 1,027,671 to 1,028,225
13162
mRNA_4795: 13163 - Hypothetical Protein, at 1,028,579 to 1,029,667
13163
mRNA_4796: 13164 - Hypothetical Protein, at 1,031,136 to 1,031,744
13164
mRNA_4797: 13165 - K02901 RP-L27e, RPL27 large subunit ribosomal protein L27e, at 1,032,493 to 1,033,632
13165
mRNA_4798: 13166 - Hypothetical Protein, at 1,034,255 to 1,037,154
13166
Group
Condition
mRNA
_4794
mRNA
_4795
mRNA
_4796
mRNA
_4797
mRNA
_4798
13162
13163
13164
13165
13166
ypd buoyancy
40 hrs No Buoyancy Separation
-1.2
-0.4
N.D.
N.D.
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.2
N.D.
N.D.
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
-0.0
N.D.
N.D.
-0.1
growth on oleic acid
YNB Glucose
+0.0
-0.0
N.D.
N.D.
-0.7
growth on oleic acid
YNB Oleic Acid
-0.0
-0.2
N.D.
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
+0.4
N.D.
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
-0.3
+0.2
N.D.
N.D.
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
N.D.
N.D.
+0.1
auxotrophy
Dropout Complete
+0.3
-0.2
N.D.
N.D.
-0.1
growth on ypd
YPD
-0.4
+0.5
N.D.
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.1
N.D.
N.D.
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.2
N.D.
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
+0.2
N.D.
N.D.
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.2
N.D.
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.3
N.D.
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.0
N.D.
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
+0.4
N.D.
N.D.
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.0
-0.1
N.D.
N.D.
-0.4
auxotrophy
YNB Glucose
+0.1
+0.4
N.D.
N.D.
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.2
N.D.
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.7
+0.7
N.D.
N.D.
-0.4
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