Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13166 and 13167 are separated by 1639 nucleotides13167 and 13168 are separated by 783 nucleotides13168 and 13169 are separated by 90 nucleotides13169 and 13170 are separated by 265 nucleotides mRNA_4798: 13166 - Hypothetical Protein, at 1,034,255 to 1,037,154 13166 mRNA_4799: 13167 - K05676 ABCD2, ALDL1 ATP-binding cassette, subfamily D (ALD), member 2, at 1,038,794 to 1,042,061 13167 mRNA_4800: 13168 - HMMPfam-Glycosyl transferases group 1-PF00534,SUPERFAMILY--SSF53756, at 1,042,845 to 1,046,169 13168 mRNA_4801: 13169 - HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994, at 1,046,260 to 1,047,966 13169 mRNA_4802: 13170 - K09313 CUTL homeobox protein cut-like, at 1,048,232 to 1,051,035 13170
Group Condition mRNA_4798 mRNA_4799 mRNA_4800 mRNA_4801 mRNA_4802
13166 13167 13168 13169 13170
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.1 -0.3 -1.7 -0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.7 -0.2 -0.1 +0.7
growth on ypd YPD -0.1 -0.1 -0.2 -0.4 +0.3
growth on oleic acid YNB Glucose -0.7 -0.1 -0.1 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.1 -0.1 +0.9 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.0 -0.2 -0.4 +0.7
growth on ricinoleic acid YNB Glucose -0.1 -0.1 -0.1 -0.1 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.1 -0.1 +0.1 +1.0
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.1 -0.0 +0.4 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.3 -0.3 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.1 +0.0 +1.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.4 -0.0 +0.8 -0.4
auxotrophy Dropout Complete -0.1 -0.1 -0.1 +0.1 +1.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.1 -0.2 -0.3 +1.2
auxotrophy YNB Glucose +0.2 -0.1 +0.0 +0.1 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.0 +0.0 +1.3 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.0 +0.0 +0.6 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.1 -0.1 +1.6 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.1 +0.1 +0.4 +0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 -0.0 +1.5 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.4 -0.0 +1.0 +0.6
remove
mRNA_4798
plot
remove
mRNA_4799
plot
remove
mRNA_4800
remove
mRNA_4801
plot
remove
mRNA_4802
plot