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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13167 and 13168 are separated by 783 nucleotides
13168 and 13169 are separated by 90 nucleotides
13169 and 13170 are separated by 265 nucleotides
13170 and 13171 are separated by 347 nucleotides
mRNA_4799: 13167 - K05676 ABCD2, ALDL1 ATP-binding cassette, subfamily D (ALD), member 2, at 1,038,794 to 1,042,061
13167
mRNA_4800: 13168 - HMMPfam-Glycosyl transferases group 1-PF00534,SUPERFAMILY--SSF53756, at 1,042,845 to 1,046,169
13168
mRNA_4801: 13169 - HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994, at 1,046,260 to 1,047,966
13169
mRNA_4802: 13170 - K09313 CUTL homeobox protein cut-like, at 1,048,232 to 1,051,035
13170
mRNA_4803: 13171 - BLAST ribosomal protein Mrp49 [Schizosaccharomyces octo..., at 1,051,383 to 1,052,079
13171
Group
Condition
mRNA
_4799
mRNA
_4800
mRNA
_4801
mRNA
_4802
mRNA
_4803
13167
13168
13169
13170
13171
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.3
-1.7
-0.0
N.D.
growth on oleic acid
YNB Oleic Acid
-0.7
-0.2
-0.1
+0.7
N.D.
growth on ypd
YPD
-0.1
-0.2
-0.4
+0.3
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.2
-0.4
+0.7
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.0
+0.4
-0.1
N.D.
growth on ricinoleic acid
YNB Glucose
-0.1
-0.1
-0.1
+0.6
N.D.
growth on oleic acid
YNB Glucose
-0.1
-0.1
+0.3
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
+0.9
-0.4
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.3
+0.5
+0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.2
-0.3
+1.2
N.D.
auxotrophy
YNB Glucose
-0.1
+0.0
+0.1
+0.6
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.0
+0.6
+0.0
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
-0.0
+0.8
-0.4
N.D.
auxotrophy
Dropout Complete
-0.1
-0.1
+0.1
+1.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.1
+0.1
+1.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.0
+1.1
+0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.0
+1.0
+0.6
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.0
+1.5
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.0
+1.3
+0.0
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.1
+0.4
+0.7
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
+1.6
+0.2
N.D.
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