Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13169 and 13170 are separated by 265 nucleotides
13170 and 13171 are separated by 347 nucleotides
13171 and 13172 are separated by 285 nucleotides
13172 and 13173 are separated by 912 nucleotides
mRNA_4801: 13169 - HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994, at 1,046,260 to 1,047,966
13169
mRNA_4802: 13170 - K09313 CUTL homeobox protein cut-like, at 1,048,232 to 1,051,035
13170
mRNA_4803: 13171 - BLAST ribosomal protein Mrp49 [Schizosaccharomyces octo..., at 1,051,383 to 1,052,079
13171
mRNA_4804: 13172 - HMMPfam-PAP2 superfamily-PF01569, at 1,052,365 to 1,054,205
13172
mRNA_4805: 13173 - ProSiteProfiles-BTB domain profile.-PS50097, at 1,055,118 to 1,056,196
13173
Group
Condition
mRNA
_4801
mRNA
_4802
mRNA
_4803
mRNA
_4804
mRNA
_4805
13169
13170
13171
13172
13173
ypd buoyancy
40 hrs No Buoyancy Separation
-1.7
-0.0
N.D.
-1.0
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+1.2
N.D.
-2.1
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
+0.6
N.D.
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.7
N.D.
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.9
-0.4
N.D.
-0.0
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
+0.7
N.D.
-0.4
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.8
-0.4
N.D.
-0.0
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+1.5
-0.0
N.D.
-0.2
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
+0.1
N.D.
-0.1
+0.1
growth on oleic acid
YNB Glucose
+0.3
+0.2
N.D.
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.1
+0.1
N.D.
+0.3
-0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.6
+0.0
N.D.
-0.2
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.4
-0.1
N.D.
+0.0
+0.6
auxotrophy
YNB Glucose 75mM Methionine
+0.4
+0.7
N.D.
+0.2
-0.3
growth on ypd
YPD
-0.4
+0.3
N.D.
+0.1
+1.1
auxotrophy
Dropout Complete
+0.1
+1.0
N.D.
+0.1
+0.1
auxotrophy
YNB Glucose
+0.1
+0.6
N.D.
+0.5
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+1.0
N.D.
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.3
+0.0
N.D.
+0.5
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.6
+0.2
N.D.
+0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+1.0
+0.6
N.D.
+0.1
+0.7
remove
mRNA_4801
plot
remove
mRNA_4802
plot
remove
mRNA_4803
remove
mRNA_4804
plot
remove
mRNA_4805
plot