Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13173 and 13174 are separated by 1007 nucleotides
13174 and 13175 are separated by 326 nucleotides
13175 and 13176 are separated by 756 nucleotides
13176 and 13177 are separated by 149 nucleotides
mRNA_4805: 13173 - ProSiteProfiles-BTB domain profile.-PS50097, at 1,055,118 to 1,056,196
13173
mRNA_4806: 13174 - Hypothetical Protein, at 1,057,204 to 1,058,778
13174
mRNA_4807: 13175 - K03119 tauD taurine dioxygenase, at 1,059,105 to 1,060,772
13175
mRNA_4808: 13176 - K12880 THOC3 THO complex subunit 3, at 1,061,529 to 1,063,050
13176
mRNA_4809: 13177 - Hypothetical Protein, at 1,063,200 to 1,067,794
13177
Group
Condition
mRNA
_4805
mRNA
_4806
mRNA
_4807
mRNA
_4808
mRNA
_4809
13173
13174
13175
13176
13177
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.5
-1.6
-0.7
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
+0.6
-0.4
-0.0
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
-0.0
+0.4
-0.6
+0.3
growth on ricinoleic acid
YNB Glucose
-0.2
-0.2
+0.4
-0.3
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.1
+0.1
-0.6
+0.3
growth on oleic acid
YNB Oleic Acid
+0.3
+0.2
+0.0
-0.4
-0.1
growth on oleic acid
YNB Glucose
+0.1
+0.1
+0.1
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.7
-0.3
-0.2
+0.2
auxotrophy
Dropout Complete
+0.1
+0.1
-0.1
+0.2
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.1
+0.3
+0.0
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.7
-0.2
-0.2
+0.2
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.7
-0.4
+0.1
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.5
-0.1
-0.1
+0.1
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.0
+0.4
+0.2
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.6
+0.4
-0.1
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.9
+0.2
+0.3
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.2
+0.6
-0.4
+0.6
auxotrophy
YNB Glucose
+0.2
+0.2
+0.1
+0.3
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.6
+0.5
+0.0
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.6
+0.0
+0.5
+0.0
+0.2
growth on ypd
YPD
+1.1
-0.1
+1.2
-0.2
+0.6
remove
mRNA_4805
plot
remove
mRNA_4806
plot
remove
mRNA_4807
remove
mRNA_4808
plot
remove
mRNA_4809
plot