Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13176 and 13177 are separated by 149 nucleotides13177 and 13178 are separated by 302 nucleotides13178 and 13179 are separated by 1224 nucleotides13179 and 13180 are separated by 569 nucleotides mRNA_4808: 13176 - K12880 THOC3 THO complex subunit 3, at 1,061,529 to 1,063,050 13176 mRNA_4809: 13177 - Hypothetical Protein, at 1,063,200 to 1,067,794 13177 mRNA_4810: 13178 - KOG1304 Amino acid transporters, at 1,068,097 to 1,069,702 13178 mRNA_4811: 13179 - Hypothetical Protein, at 1,070,927 to 1,071,764 13179 mRNA_4812: 13180 - K15255 PIF1 ATP-dependent DNA helicase PIF1, at 1,072,334 to 1,073,346 13180
Group Condition mRNA_4808 mRNA_4809 mRNA_4810 mRNA_4811 mRNA_4812
13176 13177 13178 13179 13180
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.2 +0.1 N.D. -1.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.5 -0.0 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.0 -0.1 N.D. -0.3
growth on oleic acid YNB Oleic Acid -0.4 -0.1 -0.3 N.D. +0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.6 -0.1 N.D. +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 +0.3 +0.1 N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.6 +0.3 +0.2 N.D. +0.3
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.2 -0.2 N.D. +0.0
growth on ricinoleic acid YNB Glucose -0.3 +0.2 +0.2 N.D. +0.1
growth on oleic acid YNB Glucose -0.1 -0.0 -0.3 N.D. +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.2 -0.2 N.D. +0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.0 -0.1 N.D. +1.2
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.4 +0.1 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 +0.0 N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.6 +0.2 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.0 +0.2 N.D. +0.3
auxotrophy YNB Glucose +0.3 +0.3 +0.1 N.D. -0.0
auxotrophy Dropout Complete +0.2 +0.0 +0.1 N.D. +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.3 +0.1 N.D. +0.5
growth on ypd YPD -0.2 +0.6 -0.4 N.D. +1.2
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.4 +0.1 N.D. +0.8
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