Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13179 and 13180 are separated by 569 nucleotides
13180 and 13181 are separated by 363 nucleotides
13181 and 13182 are separated by 230 nucleotides
13182 and 13183 are separated by 51 nucleotides
mRNA_4811: 13179 - Hypothetical Protein, at 1,070,927 to 1,071,764
13179
mRNA_4812: 13180 - K15255 PIF1 ATP-dependent DNA helicase PIF1, at 1,072,334 to 1,073,346
13180
mRNA_4813: 13181 - Hypothetical Protein, at 1,073,710 to 1,074,508
13181
mRNA_4814: 13182 - HMMPfam-SnoaL-like domain-PF13577,SUPERFAMILY--SSF54427, at 1,074,739 to 1,075,935
13182
mRNA_4815: 13183 - SUPERFAMILY--SSF143575, at 1,075,987 to 1,081,197
13183
Group
Condition
mRNA
_4811
mRNA
_4812
mRNA
_4813
mRNA
_4814
mRNA
_4815
13179
13180
13181
13182
13183
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-1.2
N.D.
+0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.3
N.D.
-0.9
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.2
N.D.
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.3
N.D.
+0.1
-0.1
auxotrophy
YNB Glucose
N.D.
-0.0
N.D.
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.2
N.D.
+0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.3
N.D.
-0.2
-0.0
auxotrophy
Dropout Complete
N.D.
+0.5
N.D.
-0.6
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.4
N.D.
-0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.3
N.D.
-0.3
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.3
N.D.
-0.3
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.0
N.D.
+0.2
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
N.D.
+0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.2
N.D.
+0.1
-0.0
growth on oleic acid
YNB Glucose
N.D.
+0.5
N.D.
-0.0
-0.1
growth on ypd
YPD
N.D.
+1.2
N.D.
-0.7
-0.0
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
N.D.
+0.2
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
+0.5
N.D.
+0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.5
N.D.
+0.2
+0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.8
N.D.
-0.0
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+1.2
N.D.
-0.1
+0.2
remove
mRNA_4811
plot
remove
mRNA_4812
plot
remove
mRNA_4813
remove
mRNA_4814
plot
remove
mRNA_4815
plot