Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13180 and 13181 are separated by 363 nucleotides13181 and 13182 are separated by 230 nucleotides13182 and 13183 are separated by 51 nucleotides13183 and 13184 are separated by 474 nucleotides mRNA_4812: 13180 - K15255 PIF1 ATP-dependent DNA helicase PIF1, at 1,072,334 to 1,073,346 13180 mRNA_4813: 13181 - Hypothetical Protein, at 1,073,710 to 1,074,508 13181 mRNA_4814: 13182 - HMMPfam-SnoaL-like domain-PF13577,SUPERFAMILY--SSF54427, at 1,074,739 to 1,075,935 13182 mRNA_4815: 13183 - SUPERFAMILY--SSF143575, at 1,075,987 to 1,081,197 13183 mRNA_4816: 13184 - Interpro Protein of unknown function (DUF1777), at 1,081,672 to 1,082,583 13184
Group Condition mRNA_4812 mRNA_4813 mRNA_4814 mRNA_4815 mRNA_4816
13180 13181 13182 13183 13184
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.2 N.D. +0.2 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. -0.9 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. -0.3 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. +0.1 -0.1 N.D.
auxotrophy YNB Glucose -0.0 N.D. -0.3 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. +0.2 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. -0.2 -0.0 N.D.
auxotrophy Dropout Complete +0.5 N.D. -0.6 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 N.D. -0.2 -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. -0.3 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. -0.3 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. +0.2 +0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. +0.1 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. +0.1 -0.0 N.D.
growth on oleic acid YNB Glucose +0.5 N.D. -0.0 -0.1 N.D.
growth on ypd YPD +1.2 N.D. -0.7 -0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.1 N.D. +0.2 +0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.5 N.D. +0.1 -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.5 N.D. +0.2 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.8 N.D. -0.0 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +1.2 N.D. -0.1 +0.2 N.D.
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