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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13181 and 13182 are separated by 230 nucleotides
13182 and 13183 are separated by 51 nucleotides
13183 and 13184 are separated by 474 nucleotides
13184 and 13185 are separated by 184 nucleotides
mRNA_4813: 13181 - Hypothetical Protein, at 1,073,710 to 1,074,508
13181
mRNA_4814: 13182 - HMMPfam-SnoaL-like domain-PF13577,SUPERFAMILY--SSF54427, at 1,074,739 to 1,075,935
13182
mRNA_4815: 13183 - SUPERFAMILY--SSF143575, at 1,075,987 to 1,081,197
13183
mRNA_4816: 13184 - Interpro Protein of unknown function (DUF1777), at 1,081,672 to 1,082,583
13184
mRNA_4817: 13185 - K09966 K09966 uncharacterized protein, at 1,082,768 to 1,083,677
13185
Group
Condition
mRNA
_4813
mRNA
_4814
mRNA
_4815
mRNA
_4816
mRNA
_4817
13181
13182
13183
13184
13185
auxotrophy
Dropout Complete
N.D.
-0.6
+0.1
N.D.
-0.5
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.3
+0.1
N.D.
-0.7
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.0
+0.0
N.D.
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.1
+0.2
N.D.
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.2
-0.0
N.D.
-0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
-0.0
N.D.
-0.6
auxotrophy
YNB Glucose
N.D.
-0.3
+0.1
N.D.
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.9
+0.1
N.D.
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.3
+0.2
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.2
-0.0
N.D.
-0.1
growth on ypd
YPD
N.D.
-0.7
-0.0
N.D.
+0.5
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
-0.0
N.D.
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.3
+0.1
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.2
+0.1
N.D.
-0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
+0.0
N.D.
-0.2
growth on oleic acid
YNB Glucose
N.D.
-0.0
-0.1
N.D.
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
+0.1
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
-0.1
N.D.
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.2
+0.0
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
-0.1
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.2
-0.1
N.D.
+0.8
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