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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13184 and 13185 are separated by 184 nucleotides
13185 and 13186 are separated by 211 nucleotides
13186 and 13187 are separated by 316 nucleotides
13187 and 13188 are separated by 1019 nucleotides
mRNA_4816: 13184 - Interpro Protein of unknown function (DUF1777), at 1,081,672 to 1,082,583
13184
mRNA_4817: 13185 - K09966 K09966 uncharacterized protein, at 1,082,768 to 1,083,677
13185
mRNA_4818: 13186 - BLAST Putative BTB domain transcription factor [Penicillium..., at 1,083,889 to 1,085,359
13186
mRNA_4819: 13187 - Hypothetical Protein, at 1,085,676 to 1,087,276
13187
mRNA_4820: 13188 - Hypothetical Protein, at 1,088,296 to 1,089,046
13188
Group
Condition
mRNA
_4816
mRNA
_4817
mRNA
_4818
mRNA
_4819
mRNA
_4820
13184
13185
13186
13187
13188
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.2
-0.4
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.4
-0.0
-0.8
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.2
+0.1
-0.7
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.5
+0.1
-0.2
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.7
+0.6
-0.4
-0.1
auxotrophy
Dropout Complete
N.D.
-0.5
+0.2
-0.3
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.6
+0.1
+0.1
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.3
+0.4
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.1
-0.0
-0.6
+0.4
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.2
+0.2
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.4
-0.1
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
+0.2
+0.2
-0.5
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.0
+0.1
-0.0
+0.0
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
-0.0
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.8
-0.3
-0.4
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.7
+0.3
+0.6
+0.1
auxotrophy
YNB Glucose
N.D.
-0.2
+0.2
+0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.0
+0.3
+0.1
-0.1
growth on oleic acid
YNB Glucose
N.D.
+0.3
-0.2
-0.0
+0.3
growth on ricinoleic acid
YNB Glucose
N.D.
-0.3
+0.5
+0.0
+0.2
growth on ypd
YPD
N.D.
+0.5
-0.2
+0.4
-0.0
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