Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13186 and 13187 are separated by 316 nucleotides
13187 and 13188 are separated by 1019 nucleotides
13188 and 13189 are separated by 327 nucleotides
13189 and 13190 are separated by 667 nucleotides
mRNA_4818: 13186 - BLAST Putative BTB domain transcription factor [Penicillium..., at 1,083,889 to 1,085,359
13186
mRNA_4819: 13187 - Hypothetical Protein, at 1,085,676 to 1,087,276
13187
mRNA_4820: 13188 - Hypothetical Protein, at 1,088,296 to 1,089,046
13188
mRNA_4821: 13189 - HMMPfam-Arylsulfotransferase (ASST)-PF14269, at 1,089,374 to 1,091,580
13189
mRNA_4822: 13190 - K13800 CMPK1, UMPK UMP-CMP kinase, at 1,092,248 to 1,093,445
13190
Group
Condition
mRNA
_4818
mRNA
_4819
mRNA
_4820
mRNA
_4821
mRNA
_4822
13186
13187
13188
13189
13190
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.4
-0.6
-0.8
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.8
-0.3
-0.4
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.4
+0.1
-0.7
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.7
+0.1
-0.7
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
-0.2
-0.6
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.2
-0.5
-0.7
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.2
+0.0
-0.8
N.D.
auxotrophy
Dropout Complete
+0.2
-0.3
+0.1
-0.7
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.6
+0.4
-0.2
N.D.
auxotrophy
YNB Glucose
+0.2
+0.0
+0.2
-0.7
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.1
+0.0
-0.5
N.D.
growth on oleic acid
YNB Glucose
-0.2
-0.0
+0.3
-0.3
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
-0.2
-0.1
-0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.2
+0.1
-0.1
N.D.
growth on ypd
YPD
-0.2
+0.4
-0.0
-0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.1
-0.1
-0.4
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.0
+0.0
-0.0
N.D.
growth on ricinoleic acid
YNB Glucose
+0.5
+0.0
+0.2
-0.7
N.D.
growth on oleic acid
YNB Oleic Acid
-0.0
+0.2
+0.1
+0.0
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
-0.4
-0.1
+0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.6
+0.1
-0.2
N.D.
remove
mRNA_4818
plot
remove
mRNA_4819
plot
remove
mRNA_4820
remove
mRNA_4821
plot
remove
mRNA_4822
plot