Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13186 and 13187 are separated by 316 nucleotides13187 and 13188 are separated by 1019 nucleotides13188 and 13189 are separated by 327 nucleotides13189 and 13190 are separated by 667 nucleotides mRNA_4818: 13186 - BLAST Putative BTB domain transcription factor [Penicillium..., at 1,083,889 to 1,085,359 13186 mRNA_4819: 13187 - Hypothetical Protein, at 1,085,676 to 1,087,276 13187 mRNA_4820: 13188 - Hypothetical Protein, at 1,088,296 to 1,089,046 13188 mRNA_4821: 13189 - HMMPfam-Arylsulfotransferase (ASST)-PF14269, at 1,089,374 to 1,091,580 13189 mRNA_4822: 13190 - K13800 CMPK1, UMPK UMP-CMP kinase, at 1,092,248 to 1,093,445 13190
Group Condition mRNA_4818 mRNA_4819 mRNA_4820 mRNA_4821 mRNA_4822
13186 13187 13188 13189 13190
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.4 -0.6 -0.8 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.8 -0.3 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.4 +0.1 -0.7 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.7 +0.1 -0.7 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 -0.2 -0.6 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.2 -0.5 -0.7 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.2 +0.0 -0.8 N.D.
auxotrophy Dropout Complete +0.2 -0.3 +0.1 -0.7 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.6 +0.4 -0.2 N.D.
auxotrophy YNB Glucose +0.2 +0.0 +0.2 -0.7 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 +0.0 -0.5 N.D.
growth on oleic acid YNB Glucose -0.2 -0.0 +0.3 -0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.2 -0.1 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.2 +0.1 -0.1 N.D.
growth on ypd YPD -0.2 +0.4 -0.0 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.1 -0.1 -0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 +0.0 -0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.5 +0.0 +0.2 -0.7 N.D.
growth on oleic acid YNB Oleic Acid -0.0 +0.2 +0.1 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 -0.4 -0.1 +0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.6 +0.1 -0.2 N.D.
remove
mRNA_4818
plot
remove
mRNA_4819
plot
remove
mRNA_4820
remove
mRNA_4821
plot
remove
mRNA_4822
plot