Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13195 and 13196 are separated by 177 nucleotides
13196 and 13197 are separated by 287 nucleotides
13197 and 13198 are separated by 199 nucleotides
13198 and 13199 are separated by 124 nucleotides
mRNA_4827: 13195 - Hypothetical Protein, at 1,100,998 to 1,102,554
13195
mRNA_4828: 13196 - SUPERFAMILY--SSF52047, at 1,102,732 to 1,104,516
13196
mRNA_4829: 13197 - K01298 CPA2 carboxypeptidase A2, at 1,104,804 to 1,106,642
13197
mRNA_4830: 13198 - K03066 PSMC5, RPT6 26S proteasome regulatory subunit T6, at 1,106,842 to 1,108,313
13198
mRNA_4831: 13199 - K11559 mis12, MTW1 kinetochore protein Mis12/MTW1, at 1,108,438 to 1,109,604
13199
Group
Condition
mRNA
_4827
mRNA
_4828
mRNA
_4829
mRNA
_4830
mRNA
_4831
13195
13196
13197
13198
13199
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.5
-0.1
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.5
-0.2
N.D.
N.D.
auxotrophy
Dropout Complete
-0.2
-0.4
-0.3
N.D.
N.D.
auxotrophy
YNB Glucose
-0.2
-0.2
-0.2
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.4
-0.2
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.4
+0.0
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
-0.7
-0.0
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
+0.1
+0.3
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.5
-0.2
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.1
-0.0
N.D.
N.D.
growth on ypd
YPD
-0.0
+0.2
-0.2
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
+0.2
-0.2
-0.0
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.1
-0.3
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.1
-0.1
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
+0.3
N.D.
N.D.
growth on oleic acid
YNB Glucose
-0.2
+0.0
+0.2
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.2
+0.1
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.4
+0.3
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.4
+0.0
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.5
+0.3
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.3
+0.5
N.D.
N.D.
remove
mRNA_4827
plot
remove
mRNA_4828
plot
remove
mRNA_4829
remove
mRNA_4830
plot
remove
mRNA_4831
plot