Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13204 and 13205 are separated by 16 nucleotides13205 and 13206 are separated by 1519 nucleotides13206 and 13207 are separated by 254 nucleotides13207 and 13208 are separated by 222 nucleotides mRNA_4836: 13204 - BLAST NEK protein kinase [Microbotryum lychnidis-dioicae p1..., at 1,116,510 to 1,117,726 13204 mRNA_4837: 13205 - K20872 NEK2 NIMA (never in mitosis gene a)-related kinase 2, at 1,117,743 to 1,117,911 13205 mRNA_4838: 13206 - K00326 E1.6.2.2 cytochrome-b5 reductase, at 1,119,431 to 1,120,749 13206 mRNA_4839: 13207 - K20300 TRAPPC1, BET5 trafficking protein particle complex subunit 1, at 1,121,004 to 1,121,635 13207 mRNA_4840: 13208 - KOG4526 Predicted membrane protein, at 1,121,858 to 1,122,709 13208
Group Condition mRNA_4836 mRNA_4837 mRNA_4838 mRNA_4839 mRNA_4840
13204 13205 13206 13207 13208
ypd buoyancy 40 hrs No Buoyancy Separation -1.9 N.D. N.D. N.D. N.D.
growth on ypd YPD -0.7 N.D. N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 N.D. N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 N.D. N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.4 N.D. N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.2 N.D. N.D. N.D. N.D.
auxotrophy YNB Glucose -0.1 N.D. N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 N.D. N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.0 N.D. N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. N.D. N.D. N.D.
growth on oleic acid YNB Glucose +0.1 N.D. N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 N.D. N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.5 N.D. N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.6 N.D. N.D. N.D. N.D.
auxotrophy Dropout Complete +0.6 N.D. N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.8 N.D. N.D. N.D. N.D.
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