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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13208 and 13209 are separated by 148 nucleotides
13209 and 13210 are separated by 183 nucleotides
13210 and 13211 are separated by 154 nucleotides
13211 and 13212 are separated by 567 nucleotides
mRNA_4840: 13208 - KOG4526 Predicted membrane protein, at 1,121,858 to 1,122,709
13208
mRNA_4841: 13209 - HMMPfam-Anaphase-promoting complex subunit 5-PF12862, at 1,122,858 to 1,125,824
13209
mRNA_4842: 13210 - BLAST mitochondrial ribosomal protein subunit Mrp10 [Rh..., at 1,126,008 to 1,126,493
13210
mRNA_4843: 13211 - K14842 NSA2 ribosome biogenesis protein NSA2, at 1,126,648 to 1,127,896
13211
mRNA_4844: 13212 - Hypothetical Protein, at 1,128,464 to 1,129,999
13212
Group
Condition
mRNA
_4840
mRNA
_4841
mRNA
_4842
mRNA
_4843
mRNA
_4844
13208
13209
13210
13211
13212
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.5
N.D.
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.7
N.D.
N.D.
+0.0
growth on ypd
YPD
N.D.
-0.2
N.D.
N.D.
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.4
N.D.
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.0
N.D.
N.D.
-0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.0
N.D.
N.D.
+0.0
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
N.D.
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.2
N.D.
N.D.
-0.1
auxotrophy
YNB Glucose
N.D.
+0.2
N.D.
N.D.
-0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.3
N.D.
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.6
N.D.
N.D.
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.7
N.D.
N.D.
-0.3
growth on oleic acid
YNB Glucose
N.D.
+0.3
N.D.
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.4
N.D.
N.D.
+0.2
auxotrophy
Dropout Complete
N.D.
+0.3
N.D.
N.D.
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.7
N.D.
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.5
N.D.
N.D.
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
+0.3
N.D.
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.5
N.D.
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.6
N.D.
N.D.
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.5
N.D.
N.D.
+0.5
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