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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13211 and 13212 are separated by 567 nucleotides
13212 and 13213 are separated by 443 nucleotides
13213 and 13214 are separated by 208 nucleotides
13214 and 13215 are separated by 253 nucleotides
mRNA_4843: 13211 - K14842 NSA2 ribosome biogenesis protein NSA2, at 1,126,648 to 1,127,896
13211
mRNA_4844: 13212 - Hypothetical Protein, at 1,128,464 to 1,129,999
13212
mRNA_4845: 13213 - Hypothetical Protein, at 1,130,443 to 1,131,980
13213
mRNA_4846: 13214 - K03943 NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, at 1,132,189 to 1,133,318
13214
mRNA_4847: 13215 - Hypothetical Protein, at 1,133,572 to 1,137,413
13215
Group
Condition
mRNA
_4843
mRNA
_4844
mRNA
_4845
mRNA
_4846
mRNA
_4847
13211
13212
13213
13214
13215
growth on ypd
YPD
N.D.
-0.4
-0.2
N.D.
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.1
-0.4
N.D.
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.0
-0.3
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.2
-0.3
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
-0.1
N.D.
+0.0
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
-0.0
N.D.
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.3
+0.2
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.1
-0.0
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
-0.2
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
-0.3
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.1
-0.1
N.D.
+0.1
growth on oleic acid
YNB Glucose
N.D.
+0.1
-0.0
N.D.
+0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
+0.3
N.D.
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
+0.1
N.D.
+0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
+0.1
N.D.
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.5
+0.0
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.0
+0.3
N.D.
+0.0
auxotrophy
YNB Glucose
N.D.
-0.0
+0.3
N.D.
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
+0.3
+0.2
N.D.
+0.0
auxotrophy
Dropout Complete
N.D.
+0.3
+0.1
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.0
+0.5
N.D.
+0.1
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