Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13213 and 13214 are separated by 208 nucleotides13214 and 13215 are separated by 253 nucleotides13215 and 13216 are separated by 50 nucleotides13216 and 13217 are separated by 192 nucleotides mRNA_4845: 13213 - Hypothetical Protein, at 1,130,443 to 1,131,980 13213 mRNA_4846: 13214 - K03943 NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, at 1,132,189 to 1,133,318 13214 mRNA_4847: 13215 - Hypothetical Protein, at 1,133,572 to 1,137,413 13215 mRNA_4848: 13216 - Hypothetical Protein, at 1,137,464 to 1,141,122 13216 mRNA_4849: 13217 - HMMPfam-FAD binding domain-PF01565,HMMPfam-Berberine and berberine like-PF08031,ProSitePatterns-Oxygen oxidoreductases covalent FAD-binding site.-PS00862,ProSiteProfiles-PCMH-type FAD-binding domain profile.-PS51387,SUPERFAMILY--SSF56176, at 1,141,315 to 1,143,566 13217
Group Condition mRNA_4845 mRNA_4846 mRNA_4847 mRNA_4848 mRNA_4849
13213 13214 13215 13216 13217
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. -0.2 -0.3 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. -0.0 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. -0.2 -0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. +0.1 +0.0 -0.5
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. -0.1 -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.0 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.1 -0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 N.D. +0.1 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. +0.1 +0.0 -0.1
auxotrophy Dropout Complete +0.1 N.D. +0.1 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. +0.1 +0.0 +0.1
growth on oleic acid YNB Glucose -0.0 N.D. +0.0 -0.1 +0.1
growth on ypd YPD -0.2 N.D. +0.0 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. +0.1 -0.0 +0.2
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.0 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. +0.1 +0.1 +0.3
auxotrophy YNB Glucose +0.3 N.D. +0.1 +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. +0.0 -0.0 +0.1
growth on oleic acid YNB Oleic Acid +0.2 N.D. +0.0 +0.1 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. +0.1 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.5 N.D. +0.1 +0.1 +0.0
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