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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13218 and 13219 are separated by 288 nucleotides
13219 and 13220 are separated by 156 nucleotides
13220 and 13221 are separated by 261 nucleotides
13221 and 13222 are separated by 545 nucleotides
mRNA_4850: 13218 - K02309 DBF4 regulatory subunit for Cdc7p protein kinase, at 1,143,914 to 1,146,258
13218
mRNA_4851: 13219 - K06679 MAD1 mitotic spindle assembly checkpoint protein MAD1, at 1,146,547 to 1,149,479
13219
mRNA_4852: 13220 - Hypothetical Protein, at 1,149,636 to 1,152,739
13220
mRNA_4853: 13221 - Hypothetical Protein, at 1,153,001 to 1,154,455
13221
mRNA_4854: 13222 - ProSiteProfiles-BTB domain profile.-PS50097, at 1,155,001 to 1,156,417
13222
Group
Condition
mRNA
_4850
mRNA
_4851
mRNA
_4852
mRNA
_4853
mRNA
_4854
13218
13219
13220
13221
13222
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.7
-0.3
-0.9
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
+0.1
+0.4
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.4
-0.1
+0.0
-0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.2
-0.3
-0.1
+0.6
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.0
-0.2
-0.1
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.4
-0.3
+0.4
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.1
-0.1
+0.3
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.2
+0.1
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
+0.1
+0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.2
+0.0
-0.2
+0.5
growth on ypd
YPD
N.D.
-0.3
+0.1
+0.9
-0.2
auxotrophy
Dropout Complete
N.D.
-0.1
-0.0
-0.0
+0.7
auxotrophy
YNB Glucose
N.D.
-0.1
-0.1
-0.1
+0.9
growth on oleic acid
YNB Glucose
N.D.
+0.0
-0.1
+0.3
+0.4
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
-0.0
+0.2
+0.6
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
+0.1
+0.1
+0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
+0.0
+0.3
+0.8
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.3
+0.2
+0.4
+0.3
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
-0.3
+0.6
+0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.6
-0.1
+0.4
+0.7
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+1.0
+0.2
-0.0
+0.5
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