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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13223 and 13224 are separated by 625 nucleotides
13224 and 13225 are separated by 244 nucleotides
13225 and 13226 are separated by 453 nucleotides
13226 and 13227 are separated by 1435 nucleotides
mRNA_4855: 13223 - K02957 RP-S15Ae, RPS15A small subunit ribosomal protein S15Ae, at 1,156,892 to 1,157,465
13223
mRNA_4856: 13224 - K02962 RP-S17e, RPS17 small subunit ribosomal protein S17e, at 1,158,091 to 1,158,882
13224
mRNA_4857: 13225 - Hypothetical Protein, at 1,159,127 to 1,160,011
13225
mRNA_4858: 13226 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 1,160,465 to 1,161,653
13226
mRNA_4859: 13227 - Hypothetical Protein, at 1,163,089 to 1,163,880
13227
Group
Condition
mRNA
_4855
mRNA
_4856
mRNA
_4857
mRNA
_4858
mRNA
_4859
13223
13224
13225
13226
13227
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-0.1
-0.5
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
-0.2
-0.1
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
+0.1
-0.6
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
-0.1
+0.4
-0.6
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
+0.0
-0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.1
-0.6
+0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.0
-0.0
-0.3
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
-0.0
-0.5
+0.3
auxotrophy
Dropout Complete
N.D.
N.D.
+0.2
-0.2
-0.1
auxotrophy
YNB Glucose
N.D.
N.D.
+0.1
-0.6
+0.4
growth on oleic acid
YNB Glucose
N.D.
N.D.
-0.2
-0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
+0.1
-0.4
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.3
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
+0.0
+0.4
-0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+0.2
-0.2
+0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.2
+0.0
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
-0.1
+0.6
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.2
+0.7
-0.4
growth on ypd
YPD
N.D.
N.D.
+0.0
+0.5
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
+0.2
+0.3
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
+0.2
+0.9
+0.1
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