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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13224 and 13225 are separated by 244 nucleotides
13225 and 13226 are separated by 453 nucleotides
13226 and 13227 are separated by 1435 nucleotides
13227 and 13228 are separated by 247 nucleotides
mRNA_4856: 13224 - K02962 RP-S17e, RPS17 small subunit ribosomal protein S17e, at 1,158,091 to 1,158,882
13224
mRNA_4857: 13225 - Hypothetical Protein, at 1,159,127 to 1,160,011
13225
mRNA_4858: 13226 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 1,160,465 to 1,161,653
13226
mRNA_4859: 13227 - Hypothetical Protein, at 1,163,089 to 1,163,880
13227
mRNA_4860: 13228 - K13237 DECR2 peroxisomal 2,4-dienoyl-CoA reductase, at 1,164,128 to 1,165,413
13228
Group
Condition
mRNA
_4856
mRNA
_4857
mRNA
_4858
mRNA
_4859
mRNA
_4860
13224
13225
13226
13227
13228
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.1
-0.5
-0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.1
-0.6
+0.1
-0.3
auxotrophy
YNB Glucose
N.D.
+0.1
-0.6
+0.4
-0.3
auxotrophy
Dropout Complete
N.D.
+0.2
-0.2
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.2
-0.1
-0.4
+0.3
growth on oleic acid
YNB Oleic Acid
N.D.
-0.0
-0.5
+0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
-0.0
-0.3
-0.0
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.0
-0.2
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.1
+0.4
-0.6
+0.2
growth on oleic acid
YNB Glucose
N.D.
-0.2
-0.0
+0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
-0.6
+0.2
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.3
-0.3
+0.1
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
+0.6
-0.1
-0.5
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.2
-0.2
+0.0
+0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
+0.0
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.0
+0.4
-0.3
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.2
+0.3
+0.3
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.1
-0.4
+0.3
+0.4
growth on ypd
YPD
N.D.
+0.0
+0.5
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.2
+0.7
-0.4
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.2
+0.9
+0.1
-0.3
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