Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 13225 and 13226 are separated by 453 nucleotides13226 and 13227 are separated by 1435 nucleotides13227 and 13228 are separated by 247 nucleotides13228 and 13229 are separated by 327 nucleotides mRNA_4857: 13225 - Hypothetical Protein, at 1,159,127 to 1,160,011 13225 mRNA_4858: 13226 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 1,160,465 to 1,161,653 13226 mRNA_4859: 13227 - Hypothetical Protein, at 1,163,089 to 1,163,880 13227 mRNA_4860: 13228 - K13237 DECR2 peroxisomal 2,4-dienoyl-CoA reductase, at 1,164,128 to 1,165,413 13228 mRNA_4861: 13229 - BLAST NADH-ubiquinone oxidoreductase [Sanghuangporus baumii], at 1,165,741 to 1,167,081 13229
Group Condition mRNA_4857 mRNA_4858 mRNA_4859 mRNA_4860 mRNA_4861
13225 13226 13227 13228 13229
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.6 +0.1 -0.3 -0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.5 -0.0 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 -0.4 +0.3 -0.8
auxotrophy Dropout Complete +0.2 -0.2 -0.1 -0.1 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.3 +0.1 -0.1 -0.8
auxotrophy YNB Glucose +0.1 -0.6 +0.4 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.7 -0.4 -0.1 -1.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 -0.2 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.4 -0.6 +0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.3 +0.3 -0.4 -0.5
growth on ricinoleic acid YNB Glucose -0.1 +0.6 -0.1 -0.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 -0.3 -0.0 +0.3
growth on oleic acid YNB Oleic Acid -0.0 -0.5 +0.3 -0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.6 +0.2 +0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.2 +0.0 +0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.0 +0.1 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.4 -0.3 +0.2 +0.0
growth on ypd YPD +0.0 +0.5 +0.1 -0.2 -0.2
growth on oleic acid YNB Glucose -0.2 -0.0 +0.1 -0.1 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.9 +0.1 -0.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.4 +0.3 +0.4 +0.9
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