Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13228 and 13229 are separated by 327 nucleotides13229 and 13230 are separated by 112 nucleotides13230 and 13231 are separated by 217 nucleotides13231 and 13232 are separated by 146 nucleotides mRNA_4860: 13228 - K13237 DECR2 peroxisomal 2,4-dienoyl-CoA reductase, at 1,164,128 to 1,165,413 13228 mRNA_4861: 13229 - BLAST NADH-ubiquinone oxidoreductase [Sanghuangporus baumii], at 1,165,741 to 1,167,081 13229 mRNA_4862: 13230 - K00817 hisC histidinol-phosphate aminotransferase, at 1,167,194 to 1,168,610 13230 mRNA_4863: 13231 - KOG0645 WD40 repeat protein, at 1,168,828 to 1,170,396 13231 mRNA_4864: 13232 - KOG0603 Ribosomal protein S6 kinase, at 1,170,543 to 1,172,403 13232
Group Condition mRNA_4860 mRNA_4861 mRNA_4862 mRNA_4863 mRNA_4864
13228 13229 13230 13231 13232
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.8 N.D. N.D. -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.8 N.D. N.D. -0.2
growth on ypd YPD -0.2 -0.2 N.D. N.D. -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.7 N.D. N.D. +0.4
auxotrophy Dropout Complete -0.1 -0.6 N.D. N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.5 N.D. N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -1.0 N.D. N.D. +0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.3 N.D. N.D. +0.2
auxotrophy YNB Glucose -0.3 -0.3 N.D. N.D. +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.0 N.D. N.D. -0.2
growth on oleic acid YNB Oleic Acid -0.1 +0.3 N.D. N.D. -0.3
growth on ricinoleic acid YNB Glucose -0.5 -0.1 N.D. N.D. +0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.3 N.D. N.D. +0.7
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.0 N.D. N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.0 N.D. N.D. +0.4
growth on oleic acid YNB Glucose -0.1 +0.5 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.0 N.D. N.D. +0.3
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.1 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.1 N.D. N.D. +0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.3 N.D. N.D. +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.9 N.D. N.D. +0.0
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