Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13235 and 13236 are separated by 220 nucleotides13236 and 13237 are separated by 543 nucleotides13237 and 13238 are separated by 466 nucleotides13238 and 13239 are separated by 169 nucleotides mRNA_4867: 13235 - K06634 CCNH cyclin H, at 1,177,691 to 1,179,183 13235 mRNA_4868: 13236 - HMMPfam-DASH complex subunit Dad1-PF08649, at 1,179,404 to 1,180,039 13236 mRNA_4869: 13237 - K03364 CDH1 cell division cycle 20-like protein 1, cofactor of APC complex, at 1,180,583 to 1,182,754 13237 mRNA_4870: 13238 - KOG2533 Permease of the major facilitator superfamily, at 1,183,221 to 1,185,751 13238 mRNA_4871: 13239 - K03777 dld D-lactate dehydrogenase, at 1,185,921 to 1,188,048 13239
Group Condition mRNA_4867 mRNA_4868 mRNA_4869 mRNA_4870 mRNA_4871
13235 13236 13237 13238 13239
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -1.3 +0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -1.0 -0.1 -0.1
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.4 -0.5 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.5 +0.4 -0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.2 -0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.3 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.4 +0.0 +0.2
growth on oleic acid YNB Glucose N.D. N.D. +0.1 +0.0 -0.1
growth on ypd YPD N.D. N.D. -0.1 -0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.0 -0.2 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.0 -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.3 -0.1 -0.1
auxotrophy YNB Glucose N.D. N.D. +0.6 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.7 +0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.5 -0.2 +0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.7 +0.0 -0.0
auxotrophy Dropout Complete N.D. N.D. +0.6 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.7 -0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.6 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.3 +0.0 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.6 +0.2 +0.3
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