Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13237 and 13238 are separated by 466 nucleotides13238 and 13239 are separated by 169 nucleotides13239 and 13240 are separated by 649 nucleotides13240 and 13241 are separated by 1979 nucleotides mRNA_4869: 13237 - K03364 CDH1 cell division cycle 20-like protein 1, cofactor of APC complex, at 1,180,583 to 1,182,754 13237 mRNA_4870: 13238 - KOG2533 Permease of the major facilitator superfamily, at 1,183,221 to 1,185,751 13238 mRNA_4871: 13239 - K03777 dld D-lactate dehydrogenase, at 1,185,921 to 1,188,048 13239 mRNA_4872: 13240 - Hypothetical Protein, at 1,188,698 to 1,189,328 13240 mRNA_4873: 13241 - K09205 KLF8_12 krueppel-like factor 8/12, at 1,191,308 to 1,191,654 13241
Group Condition mRNA_4869 mRNA_4870 mRNA_4871 mRNA_4872 mRNA_4873
13237 13238 13239 13240 13241
facs on lipid accumulation Sorted High BODIPY Gate -1.3 +0.3 -0.2 -0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -1.0 -0.1 -0.1 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.0 +0.2 -0.8 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.4 -0.5 +0.2 N.D.
growth on ricinoleic acid YNB Glucose -0.4 -0.5 -0.1 +0.7 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.1 +0.1 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 -0.0 +0.6 N.D.
growth on oleic acid YNB Glucose +0.1 +0.0 -0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 -0.0 +0.1 -0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 +0.1 +0.4 N.D.
growth on ypd YPD -0.1 -0.1 +0.2 +0.6 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.1 -0.1 +0.8 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.7 +0.1 -0.3 +0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.6 +0.3 -0.0 +0.1 N.D.
auxotrophy YNB Glucose +0.6 -0.1 -0.1 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 +0.2 +0.3 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.2 +0.3 +1.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.2 +0.2 +0.7 N.D.
growth on oleic acid YNB Oleic Acid +0.7 +0.0 -0.0 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.0 +0.6 +0.3 N.D.
auxotrophy Dropout Complete +0.6 +0.1 -0.0 +0.7 N.D.
remove
mRNA_4869
plot
remove
mRNA_4870
plot
remove
mRNA_4871
remove
mRNA_4872
plot
remove
mRNA_4873
plot