Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13238 and 13239 are separated by 169 nucleotides13239 and 13240 are separated by 649 nucleotides13240 and 13241 are separated by 1979 nucleotides13241 and 13242 are separated by 797 nucleotides mRNA_4870: 13238 - KOG2533 Permease of the major facilitator superfamily, at 1,183,221 to 1,185,751 13238 mRNA_4871: 13239 - K03777 dld D-lactate dehydrogenase, at 1,185,921 to 1,188,048 13239 mRNA_4872: 13240 - Hypothetical Protein, at 1,188,698 to 1,189,328 13240 mRNA_4873: 13241 - K09205 KLF8_12 krueppel-like factor 8/12, at 1,191,308 to 1,191,654 13241 mRNA_4874: 13242 - KOG2922 Uncharacterized conserved protein, at 1,192,452 to 1,195,364 13242
Group Condition mRNA_4870 mRNA_4871 mRNA_4872 mRNA_4873 mRNA_4874
13238 13239 13240 13241 13242
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.3 -0.1 N.D. -1.5
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 -0.3 N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.2 -0.5 N.D. -0.2
auxotrophy YNB Glucose -0.1 -0.1 +0.6 N.D. -0.9
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.3 +1.1 N.D. -1.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.1 -0.4 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.3 +0.4 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.5 +0.2 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 +0.1 N.D. +0.4
growth on ypd YPD -0.1 +0.2 +0.6 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.2 -0.8 N.D. +1.0
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.0 +0.1 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.0 -0.0 +0.5 N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 +0.4 N.D. +0.2
growth on oleic acid YNB Glucose +0.0 -0.1 +0.3 N.D. +0.6
auxotrophy Dropout Complete +0.1 -0.0 +0.7 N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 +0.6 N.D. +0.7
growth on ricinoleic acid YNB Glucose -0.5 -0.1 +0.7 N.D. +1.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.6 +0.3 N.D. +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 +0.8 N.D. +1.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.2 +0.7 N.D. +2.0
remove
mRNA_4870
plot
remove
mRNA_4871
plot
remove
mRNA_4872
remove
mRNA_4873
plot
remove
mRNA_4874
plot