Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13239 and 13240 are separated by 649 nucleotides13240 and 13241 are separated by 1979 nucleotides13241 and 13242 are separated by 797 nucleotides13242 and 13243 are separated by 118 nucleotides mRNA_4871: 13239 - K03777 dld D-lactate dehydrogenase, at 1,185,921 to 1,188,048 13239 mRNA_4872: 13240 - Hypothetical Protein, at 1,188,698 to 1,189,328 13240 mRNA_4873: 13241 - K09205 KLF8_12 krueppel-like factor 8/12, at 1,191,308 to 1,191,654 13241 mRNA_4874: 13242 - KOG2922 Uncharacterized conserved protein, at 1,192,452 to 1,195,364 13242 mRNA_4875: 13243 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1,195,483 to 1,197,426 13243
Group Condition mRNA_4871 mRNA_4872 mRNA_4873 mRNA_4874 mRNA_4875
13239 13240 13241 13242 13243
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.1 N.D. -1.5 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.5 N.D. -0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.4 N.D. +0.0 -0.9
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +1.1 N.D. -1.5 -0.9
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.3 N.D. -0.4 +0.1
auxotrophy YNB Glucose -0.1 +0.6 N.D. -0.9 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.4 N.D. -0.3 -0.2
growth on oleic acid YNB Glucose -0.1 +0.3 N.D. +0.6 -0.8
growth on oleic acid YNB Oleic Acid -0.0 +0.5 N.D. +0.0 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.8 N.D. +1.0 -0.3
auxotrophy Dropout Complete -0.0 +0.7 N.D. -0.0 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.2 N.D. -0.1 +0.8
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.1 N.D. +0.1 +0.4
growth on ypd YPD +0.2 +0.6 N.D. -0.3 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 N.D. +0.4 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.4 N.D. +0.2 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.8 N.D. +1.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.3 N.D. +0.6 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.6 N.D. +0.7 +0.3
growth on ricinoleic acid YNB Glucose -0.1 +0.7 N.D. +1.4 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.7 N.D. +2.0 -0.4
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