Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13240 and 13241 are separated by 1979 nucleotides13241 and 13242 are separated by 797 nucleotides13242 and 13243 are separated by 118 nucleotides13243 and 13244 are separated by 797 nucleotides mRNA_4872: 13240 - Hypothetical Protein, at 1,188,698 to 1,189,328 13240 mRNA_4873: 13241 - K09205 KLF8_12 krueppel-like factor 8/12, at 1,191,308 to 1,191,654 13241 mRNA_4874: 13242 - KOG2922 Uncharacterized conserved protein, at 1,192,452 to 1,195,364 13242 mRNA_4875: 13243 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1,195,483 to 1,197,426 13243 mRNA_4876: 13244 - K20133 USP6NL USP6 N-terminal-like protein, at 1,198,224 to 1,200,676 13244
Group Condition mRNA_4872 mRNA_4873 mRNA_4874 mRNA_4875 mRNA_4876
13240 13241 13242 13243 13244
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. -1.5 -0.5 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +1.1 N.D. -1.5 -0.9 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.5 N.D. -0.2 -0.3 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 N.D. +0.0 -0.9 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.8 N.D. +1.0 -0.3 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. -0.4 +0.1 -0.0
auxotrophy YNB Glucose +0.6 N.D. -0.9 -0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.4 N.D. -0.3 -0.2 -0.4
growth on oleic acid YNB Glucose +0.3 N.D. +0.6 -0.8 -0.4
growth on oleic acid YNB Oleic Acid +0.5 N.D. +0.0 -0.4 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. +0.1 +0.4 -0.1
auxotrophy Dropout Complete +0.7 N.D. -0.0 -0.5 +0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. +0.4 +0.2 +0.0
growth on ypd YPD +0.6 N.D. -0.3 +0.2 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. -0.1 +0.8 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.4 N.D. +0.2 +0.5 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 N.D. +0.6 -0.2 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.6 N.D. +0.7 +0.3 -0.0
growth on ricinoleic acid YNB Glucose +0.7 N.D. +1.4 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 N.D. +1.1 -0.5 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 N.D. +2.0 -0.4 +0.0
remove
mRNA_4872
plot		 remove
mRNA_4873
plot		 remove
mRNA_4874		 remove
mRNA_4875
plot		 remove
mRNA_4876
plot