Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13241 and 13242 are separated by 797 nucleotides13242 and 13243 are separated by 118 nucleotides13243 and 13244 are separated by 797 nucleotides13244 and 13245 are separated by 543 nucleotides mRNA_4873: 13241 - K09205 KLF8_12 krueppel-like factor 8/12, at 1,191,308 to 1,191,654 13241 mRNA_4874: 13242 - KOG2922 Uncharacterized conserved protein, at 1,192,452 to 1,195,364 13242 mRNA_4875: 13243 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1,195,483 to 1,197,426 13243 mRNA_4876: 13244 - K20133 USP6NL USP6 N-terminal-like protein, at 1,198,224 to 1,200,676 13244 mRNA_4877: 13245 - KOG2533 Permease of the major facilitator superfamily, at 1,201,220 to 1,203,456 13245
Group Condition mRNA_4873 mRNA_4874 mRNA_4875 mRNA_4876 mRNA_4877
13241 13242 13243 13244 13245
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -1.5 -0.5 +0.1 -0.8
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 -0.3 -0.4 -0.9
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.5 -0.9 -0.2 +1.1
auxotrophy YNB Glucose N.D. -0.9 -0.1 -0.0 -0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.4 +0.1 -0.0 -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 -0.9 -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.3 -0.2 -0.4 -0.2
growth on oleic acid YNB Glucose N.D. +0.6 -0.8 -0.4 -0.3
growth on oleic acid YNB Oleic Acid N.D. +0.0 -0.4 +0.0 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 +0.8 -0.1 -1.2
growth on ypd YPD N.D. -0.3 +0.2 +0.3 -0.5
auxotrophy Dropout Complete N.D. -0.0 -0.5 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +1.0 -0.3 -0.6 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 +0.4 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.6 -0.2 +0.3 -0.5
ypd buoyancy 40 hrs High Buoyancy N.D. +0.4 +0.2 +0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.7 +0.3 -0.0 -0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.5 +0.0 -0.1
growth on ricinoleic acid YNB Glucose N.D. +1.4 -0.2 -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +1.1 -0.5 +0.5 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +2.0 -0.4 +0.0 +0.1
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