Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13242 and 13243 are separated by 118 nucleotides13243 and 13244 are separated by 797 nucleotides13244 and 13245 are separated by 543 nucleotides13245 and 13246 are separated by 1307 nucleotides mRNA_4874: 13242 - KOG2922 Uncharacterized conserved protein, at 1,192,452 to 1,195,364 13242 mRNA_4875: 13243 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1,195,483 to 1,197,426 13243 mRNA_4876: 13244 - K20133 USP6NL USP6 N-terminal-like protein, at 1,198,224 to 1,200,676 13244 mRNA_4877: 13245 - KOG2533 Permease of the major facilitator superfamily, at 1,201,220 to 1,203,456 13245 mRNA_4878: 13246 - K04348 PPP3C, CNA serine/threonine-protein phosphatase 2B catalytic subunit, at 1,204,764 to 1,207,810 13246
Group Condition mRNA_4874 mRNA_4875 mRNA_4876 mRNA_4877 mRNA_4878
13242 13243 13244 13245 13246
ypd buoyancy 40 hrs No Buoyancy Separation -1.5 -0.9 -0.2 +1.1 -1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.5 -0.5 +0.1 -0.8 +0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.1 -0.0 -1.0 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.3 -0.4 -0.9 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.8 -0.1 -1.2 -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.9 -0.2 -0.2 +0.9
growth on ypd YPD -0.3 +0.2 +0.3 -0.5 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.0 -0.3 -0.6 -0.0 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.2 +0.0 -0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.5 +0.0 -0.1 -0.1
growth on oleic acid YNB Glucose +0.6 -0.8 -0.4 -0.3 +1.6
auxotrophy YNB Glucose -0.9 -0.1 -0.0 -0.4 +2.1
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.2 -0.4 -0.2 +2.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 -0.2 +0.3 -0.5 +0.9
ypd buoyancy 40 hrs Low Buoyancy +0.7 +0.3 -0.0 -0.5 +1.0
growth on oleic acid YNB Oleic Acid +0.0 -0.4 +0.0 -0.4 +2.4
auxotrophy Dropout Complete -0.0 -0.5 +0.4 -0.1 +2.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.4 -0.1 -0.3 +1.9
growth on ricinoleic acid YNB Glucose +1.4 -0.2 -0.1 +0.1 +2.2
growth on ricinoleic acid YNB Methylricinoleic Acid +1.1 -0.5 +0.5 +0.3 +3.7
growth on ricinoleic acid YNB Ricinoleic Acid +2.0 -0.4 +0.0 +0.1 +3.4
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