Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13244 and 13245 are separated by 543 nucleotides13245 and 13246 are separated by 1307 nucleotides13246 and 13247 are separated by 628 nucleotides13247 and 13248 are separated by 367 nucleotides mRNA_4876: 13244 - K20133 USP6NL USP6 N-terminal-like protein, at 1,198,224 to 1,200,676 13244 mRNA_4877: 13245 - KOG2533 Permease of the major facilitator superfamily, at 1,201,220 to 1,203,456 13245 mRNA_4878: 13246 - K04348 PPP3C, CNA serine/threonine-protein phosphatase 2B catalytic subunit, at 1,204,764 to 1,207,810 13246 mRNA_4879: 13247 - KOG1259 Nischarin, modulator of integrin alpha5 subunit action, at 1,208,439 to 1,211,006 13247 mRNA_4880: 13248 - K17795 TIM17 mitochondrial import inner membrane translocase subunit TIM17, at 1,211,374 to 1,212,342 13248
Group Condition mRNA_4876 mRNA_4877 mRNA_4878 mRNA_4879 mRNA_4880
13244 13245 13246 13247 13248
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -1.2 -1.0 +0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -1.0 -0.5 -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.9 +0.2 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.0 +0.0 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 -0.1 -0.5 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.3 -0.2 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +1.1 -1.1 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.8 +0.8 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 +0.9 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.5 +0.9 -0.1 N.D.
growth on ypd YPD +0.3 -0.5 +0.1 +0.8 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.5 +1.0 +0.3 N.D.
growth on oleic acid YNB Glucose -0.4 -0.3 +1.6 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.2 +2.0 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 +1.9 +0.1 N.D.
auxotrophy YNB Glucose -0.0 -0.4 +2.1 +0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.0 -0.4 +2.4 -0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.1 +0.1 +2.2 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.1 +3.4 -1.3 N.D.
auxotrophy Dropout Complete +0.4 -0.1 +2.1 +0.7 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 +0.3 +3.7 -0.4 N.D.
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