Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13246 and 13247 are separated by 628 nucleotides13247 and 13248 are separated by 367 nucleotides13248 and 13249 are separated by 319 nucleotides13249 and 13250 are separated by 491 nucleotides mRNA_4878: 13246 - K04348 PPP3C, CNA serine/threonine-protein phosphatase 2B catalytic subunit, at 1,204,764 to 1,207,810 13246 mRNA_4879: 13247 - KOG1259 Nischarin, modulator of integrin alpha5 subunit action, at 1,208,439 to 1,211,006 13247 mRNA_4880: 13248 - K17795 TIM17 mitochondrial import inner membrane translocase subunit TIM17, at 1,211,374 to 1,212,342 13248 mRNA_4881: 13249 - K01890 FARSB, pheT phenylalanyl-tRNA synthetase beta chain, at 1,212,662 to 1,215,264 13249 mRNA_4882: 13250 - Hypothetical Protein, at 1,215,756 to 1,216,865 13250
Group Condition mRNA_4878 mRNA_4879 mRNA_4880 mRNA_4881 mRNA_4882
13246 13247 13248 13249 13250
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 +0.0 N.D. N.D. -1.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.5 N.D. N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 +0.5 N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.3 N.D. N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.2 N.D. N.D. +0.4
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 N.D. N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.4 N.D. N.D. +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.9 -0.3 N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.8 -0.2 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.9 -0.1 N.D. N.D. +0.2
growth on ypd YPD +0.1 +0.8 N.D. N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +1.0 +0.3 N.D. N.D. +0.1
growth on oleic acid YNB Glucose +1.6 -0.1 N.D. N.D. +0.3
growth on ricinoleic acid YNB Glucose +2.2 -0.2 N.D. N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine +1.9 +0.1 N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +2.0 -0.0 N.D. N.D. +0.3
auxotrophy YNB Glucose +2.1 +0.1 N.D. N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +3.4 -1.3 N.D. N.D. +0.5
growth on oleic acid YNB Oleic Acid +2.4 -0.0 N.D. N.D. +0.3
auxotrophy Dropout Complete +2.1 +0.7 N.D. N.D. +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +3.7 -0.4 N.D. N.D. +0.2
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