Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13249 and 13250 are separated by 491 nucleotides13250 and 13251 are separated by 301 nucleotides13251 and 13252 are separated by 481 nucleotides13252 and 13253 are separated by 280 nucleotides mRNA_4881: 13249 - K01890 FARSB, pheT phenylalanyl-tRNA synthetase beta chain, at 1,212,662 to 1,215,264 13249 mRNA_4882: 13250 - Hypothetical Protein, at 1,215,756 to 1,216,865 13250 mRNA_4883: 13251 - HMMPfam-Uncharacterised protein family (UPF0203)-PF05254, at 1,217,167 to 1,217,657 13251 mRNA_4884: 13252 - K07555 ATPeAF1, ATPAF1, ATP11 ATP synthase mitochondrial F1 complex assembly factor 1, at 1,218,139 to 1,219,355 13252 mRNA_4885: 13253 - K03105 SRP19 signal recognition particle subunit SRP19, at 1,219,636 to 1,220,593 13253
Group Condition mRNA_4881 mRNA_4882 mRNA_4883 mRNA_4884 mRNA_4885
13249 13250 13251 13252 13253
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 N.D. N.D. -2.7
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 N.D. N.D. -1.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 N.D. N.D. -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 N.D. N.D. -0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.0 N.D. N.D. +0.4
growth on ricinoleic acid YNB Glucose N.D. -0.2 N.D. N.D. -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 N.D. N.D. -0.6
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 N.D. N.D. -0.5
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 N.D. N.D. -0.5
auxotrophy Dropout Complete N.D. +0.4 N.D. N.D. -0.6
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 N.D. N.D. -0.1
auxotrophy YNB Glucose N.D. +0.3 N.D. N.D. -0.4
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 N.D. N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.6 N.D. N.D. -0.5
growth on oleic acid YNB Oleic Acid N.D. +0.3 N.D. N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.5 N.D. N.D. -0.3
growth on oleic acid YNB Glucose N.D. +0.3 N.D. N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 N.D. N.D. +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.4 N.D. N.D. +0.1
growth on ypd YPD N.D. +0.2 N.D. N.D. +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.2 N.D. N.D. +0.4
remove
mRNA_4881
plot		 remove
mRNA_4882
plot		 remove
mRNA_4883		 remove
mRNA_4884
plot		 remove
mRNA_4885
plot