Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13251 and 13252 are separated by 481 nucleotides13252 and 13253 are separated by 280 nucleotides13253 and 13254 are separated by 249 nucleotides13254 and 13255 are separated by 155 nucleotides mRNA_4883: 13251 - HMMPfam-Uncharacterised protein family (UPF0203)-PF05254, at 1,217,167 to 1,217,657 13251 mRNA_4884: 13252 - K07555 ATPeAF1, ATPAF1, ATP11 ATP synthase mitochondrial F1 complex assembly factor 1, at 1,218,139 to 1,219,355 13252 mRNA_4885: 13253 - K03105 SRP19 signal recognition particle subunit SRP19, at 1,219,636 to 1,220,593 13253 mRNA_4886: 13254 - Hypothetical Protein, at 1,220,843 to 1,222,544 13254 mRNA_4887: 13255 - K11365 SGF73 SAGA-associated factor 73, at 1,222,700 to 1,223,919 13255
Group Condition mRNA_4883 mRNA_4884 mRNA_4885 mRNA_4886 mRNA_4887
13251 13252 13253 13254 13255
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -2.7 +0.3 +0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.5 -0.0 -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.7 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.6 +0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -1.2 -0.0 +0.7
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.5 -0.0 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.4 +0.2 +0.0
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.3 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.1 +0.1 -0.2
auxotrophy Dropout Complete N.D. N.D. -0.6 +0.1 +0.6
auxotrophy YNB Glucose N.D. N.D. -0.4 +0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.5 +0.5 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.3 +0.1 +0.5
growth on ypd YPD N.D. N.D. +0.3 +0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.1 +0.5 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.3 -0.3 +0.7
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.4 +0.5 -0.1
growth on oleic acid YNB Glucose N.D. N.D. +0.0 +0.7 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.3 +0.5 +0.9
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.2 +1.0 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.4 +0.2 +1.0
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