Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13252 and 13253 are separated by 280 nucleotides
13253 and 13254 are separated by 249 nucleotides
13254 and 13255 are separated by 155 nucleotides
13255 and 13256 are separated by 694 nucleotides
mRNA_4884: 13252 - K07555 ATPeAF1, ATPAF1, ATP11 ATP synthase mitochondrial F1 complex assembly factor 1, at 1,218,139 to 1,219,355
13252
mRNA_4885: 13253 - K03105 SRP19 signal recognition particle subunit SRP19, at 1,219,636 to 1,220,593
13253
mRNA_4886: 13254 - Hypothetical Protein, at 1,220,843 to 1,222,544
13254
mRNA_4887: 13255 - K11365 SGF73 SAGA-associated factor 73, at 1,222,700 to 1,223,919
13255
mRNA_4888: 13256 - K20044 PICALM phosphatidylinositol-binding clathrin assembly protein, at 1,224,614 to 1,227,335
13256
Group
Condition
mRNA
_4884
mRNA
_4885
mRNA
_4886
mRNA
_4887
mRNA
_4888
13252
13253
13254
13255
13256
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-2.7
+0.3
+0.4
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.5
-0.0
-0.9
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.7
+0.1
-0.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-1.2
-0.0
+0.7
-0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.5
-0.0
+0.3
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.6
+0.0
+0.0
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.3
+0.1
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
+0.1
-0.2
-0.2
auxotrophy
Dropout Complete
N.D.
-0.6
+0.1
+0.6
-0.3
auxotrophy
YNB Glucose
N.D.
-0.4
+0.5
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.4
+0.2
+0.0
+0.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.3
+0.1
+0.5
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.4
+0.5
-0.1
-0.6
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.5
+0.5
+0.3
-0.2
growth on ypd
YPD
N.D.
+0.3
+0.2
-0.0
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.3
-0.3
+0.7
-0.2
growth on oleic acid
YNB Glucose
N.D.
+0.0
+0.7
+0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.1
+0.5
+0.1
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.4
+0.2
+1.0
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.3
+0.5
+0.9
+0.0
growth on oleic acid
YNB Oleic Acid
N.D.
-0.2
+1.0
+0.6
+0.1
remove
mRNA_4884
plot
remove
mRNA_4885
plot
remove
mRNA_4886
remove
mRNA_4887
plot
remove
mRNA_4888
plot