Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13253 and 13254 are separated by 249 nucleotides13254 and 13255 are separated by 155 nucleotides13255 and 13256 are separated by 694 nucleotides13256 and 13257 are separated by 87 nucleotides mRNA_4885: 13253 - K03105 SRP19 signal recognition particle subunit SRP19, at 1,219,636 to 1,220,593 13253 mRNA_4886: 13254 - Hypothetical Protein, at 1,220,843 to 1,222,544 13254 mRNA_4887: 13255 - K11365 SGF73 SAGA-associated factor 73, at 1,222,700 to 1,223,919 13255 mRNA_4888: 13256 - K20044 PICALM phosphatidylinositol-binding clathrin assembly protein, at 1,224,614 to 1,227,335 13256 mRNA_4889: 13257 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1,227,423 to 1,230,111 13257
Group Condition mRNA_4885 mRNA_4886 mRNA_4887 mRNA_4888 mRNA_4889
13253 13254 13255 13256 13257
buoyancy on lipid accumulation 40 hrs High Buoyancy -2.7 +0.3 +0.4 -0.2 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.0 -0.9 -0.2 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 +0.1 -0.3 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -1.2 -0.0 +0.7 -0.3 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.3 +0.7 -0.2 -1.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 +0.0 +0.0 +0.1 -0.3
auxotrophy Dropout Complete -0.6 +0.1 +0.6 -0.3 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.0 +0.3 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.2 +0.0 +0.0 -0.3
growth on ricinoleic acid YNB Glucose -0.3 +0.1 -0.1 -0.2 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.1 +0.5 -0.3 -0.3
auxotrophy YNB Glucose -0.4 +0.5 +0.1 -0.3 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.5 +0.5 +0.3 -0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 -0.2 -0.2 +0.2
growth on ypd YPD +0.3 +0.2 -0.0 -0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.5 +0.1 +0.2 -0.7
growth on oleic acid YNB Glucose +0.0 +0.7 +0.1 -0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.5 +0.9 +0.0 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.5 -0.1 -0.6 +0.7
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.2 +1.0 -0.5 -0.2
growth on oleic acid YNB Oleic Acid -0.2 +1.0 +0.6 +0.1 -0.1
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