Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13266 and 13267 are separated by 119 nucleotides13267 and 13268 are separated by 504 nucleotides13268 and 13269 are separated by 592 nucleotides13269 and 13270 are separated by 439 nucleotides mRNA_4898: 13266 - HMMPfam-TAP-like protein-PF08386,SUPERFAMILY--SSF53474, at 1,253,666 to 1,256,190 13266 mRNA_4899: 13267 - KOG4705 Uncharacterized conserved protein, at 1,256,310 to 1,257,849 13267 mRNA_4900: 13268 - HMMPfam-NADH-ubiquinone oxidoreductase B12 subunit family-PF08122, at 1,258,354 to 1,258,880 13268 mRNA_4901: 13269 - K03163 TOP1 DNA topoisomerase I, at 1,259,473 to 1,262,647 13269 mRNA_4902: 13270 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1,263,087 to 1,265,892 13270
Group Condition mRNA_4898 mRNA_4899 mRNA_4900 mRNA_4901 mRNA_4902
13266 13267 13268 13269 13270
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -1.6 N.D. N.D. +0.0
auxotrophy YNB Glucose +0.1 -0.9 N.D. N.D. -0.1
growth on ypd YPD +0.3 -1.2 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -1.0 N.D. N.D. +0.1
auxotrophy Dropout Complete -0.1 -0.5 N.D. N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.7 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.7 N.D. N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.2 N.D. N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.2 N.D. N.D. -0.2
growth on oleic acid YNB Glucose +0.2 -0.6 N.D. N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.3 +0.1 N.D. N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.3 N.D. N.D. -0.3
growth on oleic acid YNB Oleic Acid +0.2 -0.2 N.D. N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.1 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.2 N.D. N.D. +0.3
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.1 N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.0 N.D. N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.6 N.D. N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.6 N.D. N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.3 N.D. N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +1.0 N.D. N.D. -0.3
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