Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13274 and 13275 are separated by 288 nucleotides
13275 and 13276 are separated by 281 nucleotides
13276 and 13277 are separated by 495 nucleotides
13277 and 13278 are separated by 350 nucleotides
mRNA_4906: 13274 - K03540 RPR2, RPP21 ribonuclease P protein subunit RPR2, at 1,273,469 to 1,274,303
13274
mRNA_4907: 13275 - HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427, at 1,274,592 to 1,274,946
13275
mRNA_4908: 13276 - K15163 SRB8, MED12 mediator of RNA polymerase II transcription subunit 12, fungi type, at 1,275,228 to 1,281,484
13276
mRNA_4909: 13277 - KOG1339 Aspartyl protease, at 1,281,980 to 1,284,451
13277
mRNA_4910: 13278 - K14555 UTP13, TBL3 U3 small nucleolar RNA-associated protein 13, at 1,284,802 to 1,288,001
13278
Group
Condition
mRNA
_4906
mRNA
_4907
mRNA
_4908
mRNA
_4909
mRNA
_4910
13274
13275
13276
13277
13278
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-1.3
-0.2
-3.6
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
-1.3
-0.1
-3.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
-0.2
+0.1
-3.5
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
-1.0
+0.0
-2.6
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
-1.2
-0.1
-1.8
auxotrophy
YNB Glucose
N.D.
N.D.
+0.0
+0.1
-2.3
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
-0.0
+0.2
-2.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+0.2
-0.1
-1.6
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.1
-0.0
-1.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
-0.1
+0.1
-1.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.2
+0.1
-1.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.1
+0.2
-1.3
auxotrophy
Dropout Complete
N.D.
N.D.
+0.1
+0.1
-1.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
-0.3
+0.2
-0.8
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
+0.1
-0.0
-0.7
growth on oleic acid
YNB Glucose
N.D.
N.D.
+0.2
+0.1
-0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
+0.0
+0.2
-0.4
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
+0.1
-0.1
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
-0.0
+0.0
+0.4
growth on ypd
YPD
N.D.
N.D.
-0.0
-0.2
+0.8
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.1
-0.0
+0.7
remove
mRNA_4906
plot
remove
mRNA_4907
plot
remove
mRNA_4908
remove
mRNA_4909
plot
remove
mRNA_4910
plot