Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13277 and 13278 are separated by 350 nucleotides13278 and 13279 are separated by 300 nucleotides13279 and 13280 are separated by 59 nucleotides13280 and 13281 are separated by 303 nucleotides mRNA_4909: 13277 - KOG1339 Aspartyl protease, at 1,281,980 to 1,284,451 13277 mRNA_4910: 13278 - K14555 UTP13, TBL3 U3 small nucleolar RNA-associated protein 13, at 1,284,802 to 1,288,001 13278 mRNA_4911: 13279 - BLAST pre-mrna-splicing factor cwc22 [Moniliophthora ro..., at 1,288,302 to 1,289,594 13279 mRNA_4912: 13280 - KOG3309 Ferredoxin, at 1,289,654 to 1,291,365 13280 mRNA_4913: 13281 - HMMPfam-Spermine/spermidine synthase-PF01564,ProSiteProfiles-Polyamine biosynthesis (PABS) domain profile.-PS51006,SUPERFAMILY--SSF53335, at 1,291,669 to 1,293,879 13281
Group Condition mRNA_4909 mRNA_4910 mRNA_4911 mRNA_4912 mRNA_4913
13277 13278 13279 13280 13281
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -3.1 +0.1 -0.7 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -3.6 +0.1 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -3.5 +0.6 -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -2.6 +0.1 -0.0 +0.2
growth on ricinoleic acid YNB Glucose +0.2 -2.3 +0.4 -0.3 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -1.4 -0.1 -0.5 +0.1
auxotrophy YNB Glucose +0.1 -2.3 +0.0 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -1.0 +0.5 -1.3 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.7 -0.1 -0.4 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -1.8 +0.5 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -1.6 +0.1 +0.6 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 -1.3 -0.4 +1.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -1.3 +0.9 -0.7 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.4 +0.8 -1.6 +0.5
auxotrophy Dropout Complete +0.1 -1.2 +0.1 +0.7 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.8 +0.7 -0.2 +0.2
growth on ypd YPD -0.2 +0.8 +0.7 -1.0 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.4 +0.0 -0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.1 +0.2 +0.5 -0.4 +0.0
growth on oleic acid YNB Glucose +0.1 -0.8 +0.8 +0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.7 +0.4 -0.1 +0.2
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