Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13278 and 13279 are separated by 300 nucleotides13279 and 13280 are separated by 59 nucleotides13280 and 13281 are separated by 303 nucleotides13281 and 13282 are separated by 790 nucleotides mRNA_4910: 13278 - K14555 UTP13, TBL3 U3 small nucleolar RNA-associated protein 13, at 1,284,802 to 1,288,001 13278 mRNA_4911: 13279 - BLAST pre-mrna-splicing factor cwc22 [Moniliophthora ro..., at 1,288,302 to 1,289,594 13279 mRNA_4912: 13280 - KOG3309 Ferredoxin, at 1,289,654 to 1,291,365 13280 mRNA_4913: 13281 - HMMPfam-Spermine/spermidine synthase-PF01564,ProSiteProfiles-Polyamine biosynthesis (PABS) domain profile.-PS51006,SUPERFAMILY--SSF53335, at 1,291,669 to 1,293,879 13281 mRNA_4914: 13282 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 1,294,670 to 1,297,098 13282
Group Condition mRNA_4910 mRNA_4911 mRNA_4912 mRNA_4913 mRNA_4914
13278 13279 13280 13281 13282
growth on ricinoleic acid YNB Ricinoleic Acid -3.1 +0.1 -0.7 -0.5 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -3.6 +0.1 -0.2 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -3.5 +0.6 -0.2 -0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -2.6 +0.1 -0.0 +0.2 -0.2
growth on ricinoleic acid YNB Glucose -2.3 +0.4 -0.3 -0.3 +0.1
auxotrophy YNB Glucose -2.3 +0.0 +0.4 -0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 -0.1 -0.5 +0.1 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -1.8 +0.5 +0.1 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.0 +0.5 -1.3 +0.2 +0.3
auxotrophy YNB Glucose 75mM Methionine -1.6 +0.1 +0.6 +0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.7 -0.1 -0.4 +0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine -1.3 -0.4 +1.1 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.8 -1.6 +0.5 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.3 +0.9 -0.7 +0.4 +0.2
auxotrophy Dropout Complete -1.2 +0.1 +0.7 -0.1 +0.2
growth on oleic acid YNB Glucose -0.8 +0.8 +0.1 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 +0.7 -0.2 +0.2 +0.4
growth on oleic acid YNB Oleic Acid +0.2 +0.5 -0.4 +0.0 +0.1
growth on ypd YPD +0.8 +0.7 -1.0 -0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.0 -0.1 -0.2 +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.7 +0.4 -0.1 +0.2 +0.2
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