Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13281 and 13282 are separated by 790 nucleotides13282 and 13283 are separated by 568 nucleotides13283 and 13284 are separated by 181 nucleotides13284 and 13285 are separated by 311 nucleotides mRNA_4913: 13281 - HMMPfam-Spermine/spermidine synthase-PF01564,ProSiteProfiles-Polyamine biosynthesis (PABS) domain profile.-PS51006,SUPERFAMILY--SSF53335, at 1,291,669 to 1,293,879 13281 mRNA_4914: 13282 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 1,294,670 to 1,297,098 13282 mRNA_4915: 13283 - HMMPfam-Complex1_LYR-like-PF13233, at 1,297,667 to 1,298,264 13283 mRNA_4916: 13284 - Hypothetical Protein, at 1,298,446 to 1,299,767 13284 mRNA_4917: 13285 - KOG2920 Predicted methyltransferase, at 1,300,079 to 1,301,093 13285
Group Condition mRNA_4913 mRNA_4914 mRNA_4915 mRNA_4916 mRNA_4917
13281 13282 13283 13284 13285
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.4 N.D. -1.4 -1.9
growth on ypd YPD -0.2 +0.1 N.D. +0.1 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.2 N.D. -0.2 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.0 N.D. -0.4 -0.9
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.4 N.D. -0.7 +0.1
auxotrophy YNB Glucose -0.1 -0.2 N.D. -0.3 +0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.2 N.D. -0.5 +0.8
growth on oleic acid YNB Oleic Acid +0.0 +0.1 N.D. -0.5 +0.4
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 N.D. -0.5 +0.8
auxotrophy Dropout Complete -0.1 +0.2 N.D. -0.1 +0.3
growth on oleic acid YNB Glucose +0.1 -0.3 N.D. -0.1 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.2 N.D. -0.1 -0.2
growth on ricinoleic acid YNB Glucose -0.3 +0.1 N.D. -0.3 +0.9
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.0 N.D. -0.0 +0.9
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.0 N.D. -0.2 +1.0
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.3 N.D. +0.1 +0.8
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.2 N.D. +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.4 N.D. -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.0 N.D. +0.4 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.3 N.D. -0.4 +0.9
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.5 N.D. +0.5 +0.3
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