Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13284 and 13285 are separated by 311 nucleotides13285 and 13286 are separated by 156 nucleotides13286 and 13287 are separated by 371 nucleotides13287 and 13288 are separated by 749 nucleotides mRNA_4916: 13284 - Hypothetical Protein, at 1,298,446 to 1,299,767 13284 mRNA_4917: 13285 - KOG2920 Predicted methyltransferase, at 1,300,079 to 1,301,093 13285 mRNA_4918: 13286 - K00327 POR NADPH-ferrihemoprotein reductase, at 1,301,250 to 1,303,860 13286 mRNA_4919: 13287 - K01768 E4.6.1.1 adenylate cyclase, at 1,304,232 to 1,310,691 13287 mRNA_4920: 13288 - K01807 rpiA ribose 5-phosphate isomerase A, at 1,311,441 to 1,312,877 13288
Group Condition mRNA_4916 mRNA_4917 mRNA_4918 mRNA_4919 mRNA_4920
13284 13285 13286 13287 13288
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 -1.9 N.D. -0.5 N.D.
growth on ypd YPD +0.1 -1.0 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.2 N.D. -0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.9 N.D. +0.7 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.7 +0.1 N.D. +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.6 N.D. +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 N.D. -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.5 +0.3 N.D. -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.8 N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.2 N.D. +0.6 N.D.
growth on oleic acid YNB Oleic Acid -0.5 +0.4 N.D. +0.7 N.D.
auxotrophy YNB Glucose -0.3 +0.4 N.D. +0.7 N.D.
growth on oleic acid YNB Glucose -0.1 +0.5 N.D. +0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.9 N.D. +0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.4 N.D. +0.1 N.D.
auxotrophy Dropout Complete -0.1 +0.3 N.D. +0.7 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.5 +0.8 N.D. +0.8 N.D.
growth on ricinoleic acid YNB Glucose -0.3 +0.9 N.D. +0.7 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.8 N.D. +0.7 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +1.0 N.D. +1.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.9 N.D. +1.2 N.D.
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